Fast R-CNN

Fast R-CNN

Accelerating Very Deep Convolutional Networks for Classification and Detection

LOGO-Net: Large-scale Deep Logo Detection and Brand Recognition with Deep Region-based Convolutional Networks

Global Weighted Average Pooling Bridges Pixel-level Localization and Image-level Classification

Neural Machine Translation with Latent Semantic of Image and Text

Una Revisión Sistemática de Métodos para Localizar Automáticamente Objetos en Imágenes

Revista Iberoamericana de Automática e Informática industrial

Double Attention-based Multimodal Neural Machine Translation with Semantic Image Regions

European Association for Machine Translation Conferences/Workshops

The Pedestrian Patterns Dataset

Human Segmentation and Tracking Survey on Masks for MADS Dataset

Fire-PPYOLOE: An Efficient Forest Fire Detector for Real-Time Wild Forest Fire Monitoring


Given a global mean temperature pathway, generate random global climate fields consistent with it and with spatial and temporal correlation derived from an ESM

Fldgen v1.0: an emulator with internal variability and space–time correlation for Earth system models

Joint emulation of Earth System Model temperature-precipitation realizations with internal variability and space-time and cross-variable correlation: fldgen v2.0 software description


A Change Detection Repo Standing on the Shoulders of Giants

Fully Convolutional Siamese Networks for Change Detection

A Spatial-Temporal Attention-Based Method and a New Dataset for Remote Sensing Image Change Detection

Remote Sensing Image Change Detection With Transformers

IEEE Transactions on Geoscience and Remote Sensing

A deeply supervised image fusion network for change detection in high resolution bi-temporal remote sensing images

ISPRS Journal of Photogrammetry and Remote Sensing

SNUNet-CD: A Densely Connected Siamese Network for Change Detection of VHR Images

IEEE Geoscience and Remote Sensing Letters

A Transformer-Based Siamese Network for Change Detection

Changer: Feature Interaction is What You Need for Change Detection

TINYCD: A (Not So) Deep Learning Model For Change Detection

A New Learning Paradigm for Foundation Model-Based Remote-Sensing Change Detection

MTP: Advancing Remote Sensing Foundation Model via Multi-Task
  Pretraining


SIMD-accelerated UTF-8 validation for Rust.

Transcoding Billions of Unicode Characters per Second with SIMD Instructions

Transcoding Unicode Characters with AVX-512 Instructions

Unicode at Gigabytes per Second

String Processing and Information Retrieval


Zero-Shot Learning in Named Entity Recognition with Common Sense Knowledge

LUKE: Deep Contextualized Entity Representations with Entity-aware Self-attention

CrossNER: Evaluating Cross-Domain Named Entity Recognition

Zero-Shot Learning in Named-Entity Recognition with External Knowledge


The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.

Highly accurate protein structure prediction with AlphaFold

Overview of the CCP4 suite and current developments

Acta crystallographica. Section D, Biological crystallography

UCSF ChimeraX: Structure visualization for researchers, educators, and developers

Protein science : a publication of the Protein Society

Accurate prediction of protein structures and interactions using a three-track neural network

Template-based protein structure modeling using the RaptorX web server

Improved protein structure prediction using predicted interresidue orientations

lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests

Raptorx: Exploiting structure information for protein alignment by statistical inference

Proteins: Structure, Function, and Bioinformatics

RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive

3DFI: a pipeline to infer protein function using structural homology


This package is dedicated to high-order optimization methods. All the methods can be used similarly to standard PyTorch optimizers.

Regularized Newton Method with Global O(1/k^2) Convergence

The First Optimal Acceleration of High-Order Methods in Smooth Convex Optimization

Hyperfast second-order local solvers for efficient statistically preconditioned distributed optimization

Advancing the lower bounds: An accelerated, stochastic, second-order method with optimal adaptation to inexactness


GeoGebra Discovery

Dealing with Degeneracies in Automated Theorem Proving in Geometry

Towards Automated Discovery of Geometrical Theorems in GeoGebra

Discovering Geometric Inequalities: The Concourse of GeoGebra Discovery, Dynamic Coloring and Maple Tools

Computer Assisted Proofs and Automated Methods in Mathematics Education

Open Geometry Prover Community Project

Automated Exploration of Envelopes and Offsets with Networking of Technologies

Showing Proofs, Assessing Difficulty with GeoGebra Discovery

Electronic Proceedings in Theoretical Computer Science

Symbolic Comparison of Geometric Quantities in GeoGebra

3D Space Trajectories and beyond: Abstract Art Creation with 3D Printing


FlexiGIS: Open source GIS-based platform for the optimisation of flexibility options in urban areas


DeepCS: Deep Code Search

Opportunities and Challenges in Code Search Tools

On the Replicability and Reproducibility of Deep Learning in Software Engineering

deGraphCS: Embedding Variable-based Flow Graph for Neural Code Search

CodeMatcher: Searching Code Based on Sequential Semantics of Important Query Words

ACM Transactions on Software Engineering and Methodology

CSRS: Code Search with Relevance Matching and Semantic Matching

Simplifying Deep-Learning-Based Model for Code Search.

Revisiting Code Search in a Two-Stage Paradigm

Code Search Debiasing:Improve Search Results beyond Overall Ranking Performance


ELECTRA: Pre-training Text Encoders as Discriminators Rather Than Generators

ProtTrans: Towards Cracking the Language of Life's Code Through Self-Supervised Deep Learning and High Performance Computing

DeBERTaV3: Improving DeBERTa using ELECTRA-Style Pre-Training with Gradient-Disentangled Embedding Sharing

Fine-Tuning Pretrained Language Models: Weight Initializations, Data Orders, and Early Stopping

Masked Language Model Scoring

Meeting of the Association for Computational Linguistics

A Comprehensive Survey of AI-Generated Content (AIGC): A History of Generative AI from GAN to ChatGPT

Retrospective Reader for Machine Reading Comprehension

BioELECTRA:Pretrained Biomedical text Encoder using Discriminators

Workshop on Biomedical Natural Language Processing

Pre-Training Transformers as Energy-Based Cloze Models

Lightweight URL-based phishing detection using natural language processing transformers for mobile devices


Inductive simulation of calorimeter showers with normalizing flows

CaloDREAM -- Detector Response Emulation via Attentive flow Matching

Convolutional L2LFlows: Generating Accurate Showers in Highly Granular Calorimeters Using Convolutional Normalizing Flows


MeerKAT calibration and imaging scripts

Analysis of physical processes in eruptive YSOs with near-infrared spectra and multiwavelength light curves

Discovery of a radio-emitting neutron star with an ultra-long spin period of 76 s

The MeerKAT Galaxy Cluster Legacy Survey I. Survey Overview and Highlights.

The 1.28 GHz MeerKAT Galactic Center Mosaic

Radio and X-Ray Observations of the Luminous Fast Blue Optical Transient AT 2020xnd

Observations of a radio-bright, X-ray obscured GRS 1915+105

Monthly Notices of the Royal Astronomical Society

MIGHTEE: are giant radio galaxies more common than we thought?

Discovery of ASKAP J173608.2–321635 as a Highly Polarized Transient Point Source with the Australian SKA Pathfinder

Radio and optical observations of the possible AE Aqr twin, LAMOST J024048.51+195226.9

MERGHERS pilot: MeerKAT discovery of diffuse emission in nine massive Sunyaev-Zel'dovich-selected galaxy clusters from ACT


package for interacting with fisheries databases at openfisheries.org


Predict mutated T-cell epitopes from sequencing data

Genomic Features of Response to Combination Immunotherapy in Patients with Advanced Non-Small-Cell Lung Cancer

Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: An exploratory multi-omic analysis

Intratumoral heterogeneity and clonal evolution in liver cancer

Somatic Mutations and Neoepitope Homology in Melanomas Treated with CTLA-4 Blockade

Landscape of oncoviral genotype and co-infection via Human papilloma and Hepatitis B viral tumor in-situ profiling

Discovering tumor-reactive T-cell receptors through single-cell sequencing of tumor-infiltrating lymphocytes

T proliferating cells derived autophagy signature associated with prognosis and immunotherapy resistance in a pan-cancer analysis


Official repository for the interface reconstruction library (IRL)

First Moments of a Polyhedron Clipped by a Paraboloid


OpenFLUID framework and applications


Conversion of coarsegrain to atomistic (complete rewrite of the original CG2AT)

Structure, mechanism, and inhibition of Hedgehog acyltransferase

Specific interactions of peripheral membrane proteins with lipids: what can molecular simulations show us?

Peptidoglycan biosynthesis is driven by lipid transfer along enzyme-substrate affinity gradients

Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export


[NIPS2023] RRHF & Wombat

LLaMA: Open and Efficient Foundation Language Models

Training a Helpful and Harmless Assistant with Reinforcement Learning from Human Feedback

RRHF: Rank Responses to Align Language Models with Human Feedback without tears

PanGu-Coder2: Boosting Large Language Models for Code with Ranking Feedback

CITING: Large Language Models Create Curriculum for Instruction Tuning


Open source speech to text models for Indic Languages

CLSRIL-23: Cross Lingual Speech Representations for Indic Languages

Vakyansh: ASR Toolkit for Low Resource Indic languages

Towards Building Text-To-Speech Systems for the Next Billion Users

Code Switched and Code Mixed Speech Recognition for Indic languages

indic-punct: An automatic punctuation restoration and inverse text normalization framework for Indic languages

Effectiveness of text to speech pseudo labels for forced alignment and cross lingual pretrained models for low resource speech recognition


Explaining LIGO’s observations via isolated binary evolution with natal kicks

PRECESSION: Dynamics of spinning black-hole binaries with python

Gravitational-wave population inference at past time infinity

Efficient multi-timescale dynamics of precessing black-hole binaries

Inferences about the distribution, merger rate, and evolutionary processes of compact binaries from gravitational wave observations


“Chorus” of recommendation models: a light and flexible PyTorch framework for Top-K recommendation.

LightGCN: Simplifying and Powering Graph Convolution Network for Recommendation

Factorizing personalized Markov chains for next-basket recommendation

Time Interval Aware Self-Attention for Sequential Recommendation

Contrastive Learning for Sequential Recommendation

Controllable Multi-Interest Framework for Recommendation

Modeling Item-Specific Temporal Dynamics of Repeat Consumption for Recommender Systems

WEB CONFERENCE 2019: PROCEEDINGS OF THE WORLD WIDE WEB CONFERENCE (WWW 2019)

Selective Fairness in Recommendation via Prompts

DiffuRec: A Diffusion Model for Sequential Recommendation

Large-scale Stochastic Optimization of NDCG Surrogates for Deep Learning with Provable Convergence

Neighborhood-based Hard Negative Mining for Sequential Recommendation

Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval


Analysis and tutorial materials associated with the NANOGrav Collaboration's search for an isotropic stochastic gravitational-wave background in 12.5-years of precision millisecond pulsar timing data.

Primordial gravitational waves from NANOGrav: A broken power-law approach

Non-tensorial gravitational wave background in NANOGrav 12.5-year data set

中国科学. 物理学 力学 天文学

Updated constraints on amplitude and tilt of the tensor primordial spectrum

Bayesian Implications for the Primordial Black Holes from NANOGrav's Pulsar-Timing Data Using the Scalar-Induced Gravitational Waves


Detecting Regulatory Elements using GRO-seq and PRO-seq

Identification of regulatory elements from nascent transcription using dREG

A-MYB and BRDT-dependent RNA Polymerase II pause release orchestrates transcriptional regulation in mammalian meiosis

Quantifying RNA synthesis at rate-limiting steps of transcription using nascent RNA-sequencing data

A bi-stable feedback loop between GDNF, EGR1, and ERα contribute to endocrine resistant breast cancer


calculate radial velocities from stellar spectra

Spectrum radial velocity analyser (SERVAL) - High-precision radial velocities and two alternative spectral indicators

A candidate super-Earth planet orbiting near the snow line of Barnard’s star

The CARMENES search for exoplanets around M dwarfs. Two temperate Earth-mass planet candidates around Teegarden's Star

e-Archivo (Universidad Carlos III de Madrid)

The CARMENES search for exoplanets around M dwarfs. Stellar atmospheric parameters of target stars with SteParSyn

The CARMENES search for exoplanets around M dwarfs: Two planets on opposite sides of the radius gap transiting the nearby M dwarf LTT 3780

Carolina Digital Repository (University of North Carolina at Chapel Hill)

The CARMENES search for exoplanets around M dwarfs. Guaranteed time observations Data Release 1 (2016-2020)

On-sky commissioning of MAROON-X: a new precision radial velocity spectrograph for Gemini North

Ground-based and Airborne Instrumentation for Astronomy VIII

The CARMENES search for exoplanets around M dwarfs The enigmatic planetary system GJ 4276: one eccentric planet or two planets in a 2:1 resonance?

The TROY project - II. Multi-technique constraints on exotrojans in nine planetary systems


A collection of structures, force constants and phonon data obtained from first-principles calculations

Anharmonicity in the High-Temperature Cmcm Phase of SnSe: Soft Modes and Three-Phonon Interactions.

Phonon anharmonicity, lifetimes, and thermal transport in CH3NH3PbI3 from many-body perturbation theory

Perspective: Theory and simulation of hybrid halide perovskites

Chemical and Lattice Stability of the Tin Sulfides

The journal of physical chemistry. C, Nanomaterials and interfaces

Microscopic origin of entropy-driven polymorphism in hybrid organic-inorganic perovskite materials

Suppression of lattice thermal conductivity by mass-conserving cation mutation in multi-component semiconductors

Magnetoelastic coupling in the cobalt adipate metal–organic framework from quasi-harmonic lattice dynamics


An open source Python server to deploy energy management solutions for buildings


GPU-Accelerated Radiative Transfer Code For Exoplanetary Atmospheres

HELIOS: AN OPEN-SOURCE, GPU-ACCELERATED RADIATIVE TRANSFER CODE FOR SELF-CONSISTENT EXOPLANETARY ATMOSPHERES

ESPRESSO high-resolution transmission spectroscopy of WASP-76 b

Self-luminous and Irradiated Exoplanetary Atmospheres Explored with HELIOS

A broadband thermal emission spectrum of the ultra-hot Jupiter WASP-18b

A reflective, metal-rich atmosphere for GJ 1214b from its JWST phase curve

The atmosphere of HD 209458b seen with ESPRESSO

Non-local thermodynamic equilibrium effects determine the upper atmospheric temperature structure of the ultra-hot Jupiter KELT-9b

K2 and Spitzer phase curves of the rocky ultra-short-period planet K2-141 b hint at a tenuous rock vapor atmosphere

Analyzing Atmospheric Temperature Profiles and Spectra of M Dwarf Rocky Planets

Observability of evaporating lava worlds


Paxos protocol framework

WPaxos: Wide Area Network Flexible Consensus

Bottlenecks in Blockchain Consensus Protocols

BigBFT: A Multileader Byzantine Fault Tolerance Protocol for High Throughput

Multilayer Environment and Toolchain for Holistic NetwOrk Design and Analysis

BunchBFT: Across-Cluster Consensus Protocol


This is the code associated with the paper A Variational Inequality Perspective for Generative Adversarial Networks.

A Variational Inequality Perspective on Generative Adversarial Networks

Competitive Physics Informed Networks

Adaptive and Universal Algorithms for Variational Inequalities with Optimal Convergence

Modeling Cloud Reflectance Fields using Conditional Generative Adversarial Networks


Fast and accurate set similarity estimation via containment min hash

Metalign: efficient alignment-based metagenomic profiling via containment min hash

Improving MinHash via the containment index with applications to metagenomic analysis

CMash: fast, multi-resolution estimation of k-mer-based Jaccard and containment indices


Machine-Translation-based sentence alignment tool for parallel text

Document-Level Machine Translation with Large Language Models

Findings of the WMT 2016 Bilingual Document Alignment Shared Task

Proceedings of the First Conference on Machine Translation: Volume 2,
          Shared Task Papers

BlonDe: An Automatic Evaluation Metric for Document-level Machine Translation

A Multilingual Parallel Corpora Collection Effort for Indian Languages

A Sentence Meaning Based Alignment Method for Parallel Text Corpora Preparation

Benchmarking LLM-based Machine Translation on Cultural Awareness

A Baseline Neural Machine Translation System for Indian Languages

Le corpus Text+Berg Une ressource parallèle alpin français-allemand (The Text+Berg Corpus An Alpine French-German Parallel Resource)

Chinese-Portuguese Machine Translation: A Study on Building Parallel Corpora from Comparable Texts

Discourse-Centric Evaluation of Document-level Machine Translation with a New Densely Annotated Parallel Corpus of Novels

Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)


Segmental Duplication Assembler (SDA).

HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads

Long-read sequence and assembly of segmental duplications

De novo assembly of human genome at single-cell levels


This GitHub repo contains all of the code for the heatwaveR package.

heatwaveR: A central algorithm for the detection of heatwaves and cold-spells


A modular framework for Visual Question Answering research by the FAIR A-STAR team

Bottom-Up and Top-Down Attention for Image Captioning and Visual Question Answering

Bilinear Attention Networks

Towards VQA Models That Can Read

Pythia v0.1: the Winning Entry to the VQA Challenge 2018

VisualMRC: Machine Reading Comprehension on Document Images


Unsupervised correction of gene independent cell responses to CRISPR-cas9

Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting

Genome-wide CRISPR screens of oral squamous cell carcinoma reveal fitness genes in the Hippo pathway

An interactive web application for processing, correcting, and visualizing genome-wide pooled CRISPR-Cas9 screens


Pseudo Likelihood Maximization for protein in Julia

Fast pseudolikelihood maximization for direct-coupling analysis of protein structure from many homologous amino-acid sequences

Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models

Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis

Proceedings of the National Academy of Sciences of the United States of America

Inferring protein-protein interaction networks from inter-protein sequence co-evolution

Parsimonious evolutionary scenario for the origin of allostery and coevolution patterns in proteins

Protein language models trained on multiple sequence alignments learn phylogenetic relationships

Impact of phylogeny on structural contact inference from protein sequence data

Prediction of Structures and Interactions from Genome Information

INTEGRATIVE STRUCTURAL BIOLOGY WITH HYBRID METHODS


Collection of commonly used RDP Tools for easy building

16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria

Butyrate Production Pathway Abundances Are Similar in Human and Nonhuman Primate Gut Microbiomes

Review, Evaluation, and Directions for Gene-Targeted Assembly for Ecological Analyses of Metagenomes

Targeted assemblies of cas1 suggest CRISPR-Cas’s response to soil warming


Faster Recurrent Neural Network Language Modeling Toolkit with Noise Contrastive Estimation and Hierarchical Softmax

Acoustic and Textual Data Augmentation for Improved ASR of Code-Switching Speech

Chat Detection in an Intelligent Assistant: Combining Task-oriented and Non-task-oriented Spoken Dialogue Systems

End-to-End Code-Switching ASR for Low-Resourced Language Pairs

Semi-supervised acoustic model training for speech with code-switching

Learning from past mistakes: improving automatic speech recognition output via noisy-clean phrase context modeling

APSIPA Transactions on Signal and Information Processing

Interactive Abstractive Summarization for Event News Tweets

Empirical Methods in Natural Language Processing

Language Models Explain Word Reading Times Better Than Empirical Predictability

Design and Structure of The Juman++ Morphological Analyzer Toolkit

Multi-Graph Decoding for Code-Switching ASR

Chinese Preposition Selection for Grammatical Error Diagnosis

International Conference on Computational Linguistics


Access data, statistics, and visualizations for New York's electricity grid.


RADseq workflow using STACKS

Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon

Predicting the genetic impact of stocking in Brook Charr (Salvelinus fontinalis) by combining RAD sequencing and modeling of explanatory variables

Genetic and morphological support for possible sympatric origin of fish from subterranean habitats

Impact of supplementation on deleterious mutation distribution in an exploited salmonid

Medaka Population Genome Structure and Demographic History Described via Genotyping-by-Sequencing

Supplementation stocking of Lake Trout (Salvelinus namaycush) in small boreal lakes: Ecotypes influence on growth and condition

Design and validation of a 63K genome-wide SNP-genotyping platform for caribou/reindeer (Rangifer tarandus)

Evolution of an Amazonian Fish Is Driven by Allopatric Divergence Rather Than Ecological Divergence

Genomic Signatures of Local Adaptation under High Gene Flow in Lumpfish—Implications for Broodstock Provenance Sourcing and Larval Production


A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.

Integrated immune dynamics define correlates of COVID-19 severity and antibody responses

Integration, exploration, and analysis of high-dimensional single-cell cytometry data using Spectre

High-parameter cytometry unmasks microglial cell spatio-temporal response kinetics in severe neuroinflammatory disease

Neutrophil Extracellular Traps Drive Dacryolithiasis

Circulating effector γδ T cell populations are associated with acute coronavirus disease 19 in unvaccinated individuals

Influence of bariatric surgery on the peripheral blood immune system of female patients with morbid obesity revealed by high-dimensional mass cytometry

Immune responses in COVID-19 respiratory tract and blood reveal mechanisms of disease severity

Suppression of neutrophils by sodium exacerbates oxidative stress and arthritis


LSTM language model with CNN over characters

Character-Aware Neural Language Models

Training Very Deep Networks

Neural Summarization by Extracting Sentences and Words

Compositional Morphology for Word Representations and Language Modelling

Arabic natural language processing: An overview

Journal of King Saud University: Computer and Information Sciences

Grapheme-level Awareness in Word Embeddings for Morphologically Rich Languages

PROCEEDINGS OF THE ELEVENTH INTERNATIONAL CONFERENCE ON LANGUAGE RESOURCES AND EVALUATION (LREC 2018)


GoldenEye Layer 7 (KeepAlive+NoCache) DoS Test Tool

Machine Learning DDoS Detection for Consumer Internet of Things Devices

A Flexible SDN-Based Architecture for Identifying and Mitigating Low-Rate DDoS Attacks Using Machine Learning

Transport and Application Layer DDoS Attacks Detection to IoT Devices by Using Machine Learning and Deep Learning Models

Two-Stage Intelligent Model for Detecting Malicious DDoS Behavior

Toward the Protection of IoT Networks: Introducing the LATAM-DDoS-IoT Dataset

Trusted Multi-Domain DDoS Detection Based on Federated Learning


Eradiate: a next-generation radiative transfer model for Earth observation applications


N-body fortran integrator

Seven temperate terrestrial planets around the nearby ultracool dwarf star TRAPPIST-1

Planetesimal rings as the cause of the Solar System's planetary architecture

Dry late accretion inferred from Venus’s coupled atmosphere and internal evolution

On the role of resonances in polluting white dwarfs by asteroids

A new photometric and dynamical study of the eclipsing binary star HW Virginis

Monthly notices of the Royal Astronomical Society

Formation of polar circumstellar discs in binary star systems

Water transport throughout the TRAPPIST-1 system: the role of planetesimals

Monthly Notices of the Royal Astronomical Society

Formation of the warped debris disc around β Pictoris


An open-source MATLAB® ADMM solver for partially decomposable conic optimization programs.

Chordal decomposition in operator-splitting methods for sparse semidefinite programs

Fast ADMM for Semidefinite Programs with Chordal Sparsity

Chordal and factor-width decompositions for scalable semidefinite and polynomial optimization

Improving Efficiency and Scalability of Sum of Squares Optimization: Recent Advances and Limitations

Fast ADMM for Sum-of-Squares Programs Using Partial Orthogonality

Exploiting Sparsity in the Coefficient Matching Conditions in Sum-of-Squares Programming Using ADMM

Fast ADMM for homogeneous self-dual embedding of sparse SDPs

Scalable analysis of linear networked systems via chordal decomposition

An Overview and Comparison of Spectral Bundle Methods for Primal and Dual Semidefinite Programs

Unfolding Projection-free SDP Relaxation of Binary Graph Classifier via GDPA Linearization


Python 3 library for processing historical English

From the Paft to the Fiiture: a Fully Automatic NMT and Word Embeddings Method for OCR Post-Correction

Recent Advances in Natural Language Processing

Revisiting NMT for Normalization of Early English Letters

North American Chapter of the Association for Computational Linguistics

Empirical Error Modeling Improves Robustness of Noisy Neural Sequence Labeling


Image Signal Processor

Gradient-Based Feature Extraction From Raw Bayer Pattern Images

IEEE transactions on image processing : a publication of the IEEE Signal Processing Society

Software-Defined Imaging: A Survey

Adversarial RAW: Image-Scaling Attack Against Imaging Pipeline


A Proof Strategy Language and Proof Script Generation for Isabelle/HOL

PaMpeR: Proof Method Recommendation System for Isabelle/HOL

Goal-Oriented Conjecturing for Isabelle/HOL

LiFtEr: Language to Encode Induction Heuristics for Isabelle/HOL

PROGRAMMING LANGUAGES AND SYSTEMS, APLAS 2019

Faster Smarter Proof by Induction in Isabelle/HOL

PROCEEDINGS OF THE THIRTIETH INTERNATIONAL JOINT CONFERENCE ON ARTIFICIAL INTELLIGENCE, IJCAI 2021

SeLFiE: Modular Semantic Reasoning for Induction in Isabelle/HOL.

Definitional Quantifiers Realise Semantic Reasoning for Proof by Induction

Smart Induction for Isabelle/HOL (System Description)


Julia implementation of MARGO, an idealized climate-economic modelling framework for Optimizing trade-offs between emissions Mitigation, Adaptation, carbon dioxide Removal, and solar Geoengineering.


PHANOTATE: a tool to annotate phage genomes.

PHANOTATE: a novel approach to gene identification in phage genomes

A Method for Improving the Accuracy and Efficiency of Bacteriophage Genome Annotation

International journal of molecular sciences

THEA: A novel approach to gene identification in phage genomes


Generating Interactive Fiction worlds from story plots

Automated Storytelling via Causal, Commonsense Plot Ordering

Bringing Stories Alive: Generating Interactive Fiction Worlds

Open-world Story Generation with Structured Knowledge Enhancement: A Comprehensive Survey


A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

mockrobiota: a public resource for microbiome bioinformatics benchmarking

Evaluation of Primers Targeting the Diazotroph Functional Gene and Development of NifMAP – A Bioinformatics Pipeline for Analyzing nifH Amplicon Data

ReprDB and panDB: minimalist databases with maximal microbial representation

LEMMI: a continuous benchmarking platform for metagenomics classifiers


[ICCV 2023] You Only Look at One Partial Sequence

Benchmarking Detection Transfer Learning with Vision Transformers

MILAN: Masked Image Pretraining on Language Assisted Representation

Unleashing Vanilla Vision Transformer with Masked Image Modeling for Object Detection

Exploring The Role of Mean Teachers in Self-supervised Masked Auto-Encoders


package for converting dicom files to nifti

nnU-Net Deep Learning Method for Segmenting Parenchyma and Determining Liver Volume From Computed Tomography Images

Annals of surgery open : perspectives of surgical history, education, and clinical approaches

Prediction of MGMT Methylation Status of Glioblastoma using Radiomics and Latent Space Shape Features

IP-UNet: Intensity Projection UNet Architecture for 3D Medical Volume Segmentation

A vendor-agnostic, PACS integrated, and DICOM-compatible software-server pipeline for testing segmentation algorithms within the clinical radiology workflow

Preparing computed tomography images for machine learning in forensic and virtual anthropology


Dfam Transposable Element Tools Docker container.

RepeatModeler2: automated genomic discovery of transposable element families

Giant lungfish genome elucidates the conquest of land by vertebrates

Genetic Diversity in Invasive Populations of Argentine Stem Weevil Associated with Adaptation to Biocontrol

Genome assembly of the Australian black tiger shrimp (Penaeus monodon) reveals a novel fragmented IHHNV EVE sequence

The genome sequence of Hirschfeldia incana, a new Brassicaceae model to improve photosynthetic light-use efficiency

The Plant journal : for cell and molecular biology

The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes

Obligate sexual reproduction of a homothallic fungus closely related to the Cryptococcus pathogenic species complex

Activation of DNA Transposons and Evolution of piRNA Genes Through Interspecific Hybridization in Xenopus Frogs

Cost-effective long-read assembly of a hybrid Formica aquilonia × Formica polyctena wood ant genome from a single haploid individual

Genome assembly and isoform analysis of a highly heterozygous New Zealand fisheries species, the tarakihi (Nemadactylus macropterus)


This tool provides an efficient implementation of the continuous bag-of-words and skip-gram architectures for computing vector representations of words. These representations can be subsequently used in many natural language processing applications and for further research.

Word2Vec

Sentiment Polarity Detection for Software Development

PROCEEDINGS 2018 IEEE/ACM 40TH INTERNATIONAL CONFERENCE ON SOFTWARE ENGINEERING (ICSE)

Dict2vec : Learning Word Embeddings using Lexical Dictionaries

Near Human-Level Performance in Grammatical Error Correction with Hybrid Machine Translation

Twitter Universal Dependency Parsing for African-American and Mainstream American English

PROCEEDINGS OF THE 56TH ANNUAL MEETING OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS (ACL), VOL 1

Bridging Semantic Gaps between Natural Languages and APIs with Word Embedding

Aspect Sentiment Classification Towards Question-Answering with Reinforced Bidirectional Attention Network

Meeting of the Association for Computational Linguistics

Low-Resource Syntactic Transfer with Unsupervised Source Reordering

Incorporating Latent Meanings of Morphological Compositions to Enhance Word Embeddings

Evaluating bilingual word embeddings on the long tail


WaveRNN Vocoder + TTS

Tacotron: Towards End-to-End Speech Synthesis

Efficient Neural Audio Synthesis

A Survey on Neural Speech Synthesis

TorchAudio: Building Blocks for Audio and Speech Processing

Any-to-Many Voice Conversion With Location-Relative Sequence-to-Sequence Modeling

IEEE/ACM Transactions on Audio, Speech, and Language Processing

Speaker Conditional WaveRNN: Towards Universal Neural Vocoder for Unseen Speaker and Recording Conditions

Enhancing Speech Intelligibility in Text-To-Speech Synthesis using Speaking Style Conversion

Towards Robust Neural Vocoding for Speech Generation: A Survey

Score and Lyrics-Free Singing Voice Generation

Maximizing Mutual Information for Tacotron


Unicoder model for understanding and generation.

XGLUE: A New Benchmark Dataset for Cross-lingual Pre-training, Understanding and Generation

XLM-K: Improving Cross-Lingual Language Model Pre-training with Multilingual Knowledge

A Survey on Large Language Models for Software Engineering

Machine-Created Universal Language for Cross-lingual Transfer

Prefix Text as a Yarn: Eliciting Non-English Alignment in Foundation Language Model


Opytimizer is a Python library consisting of meta-heuristic optimization algorithms.

Opytimizer: A Nature-Inspired Python Optimizer

Large-scale Benchmarking of Metaphor-based Optimization Heuristics


Iterated integral signature calculations

The iisignature library: efficient calculation of iterated-integral signatures and log signatures

A Data-driven Market Simulator for Small Data Environments

Sig-SDEs model for quantitative finance

Nonparametric pricing and hedging of exotic derivatives

Calculation of Iterated-Integral Signatures and Log Signatures

Numerical method for model-free pricing of exotic derivatives using rough path signatures

Sig-Networks Toolkit: Signature Networks for Longitudinal Language Modelling


A family of open-sourced Mixture-of-Experts (MoE) Large Language Models

ST-MoE: Designing Stable and Transferable Sparse Expert Models

Efficient Large Language Models: A Survey

DeepSeekMoE: Towards Ultimate Expert Specialization in Mixture-of-Experts Language Models

Data Engineering for Scaling Language Models to 128K Context

OpenMoE: An Early Effort on Open Mixture-of-Experts Language Models

MoE-Mamba: Efficient Selective State Space Models with Mixture of Experts

UniMax: Fairer and more Effective Language Sampling for Large-Scale Multilingual Pretraining

Advancing Transformer Architecture in Long-Context Large Language Models: A Comprehensive Survey

How Far Are We From AGI

OLMoE: Open Mixture-of-Experts Language Models


This repository contains the SpeechBrain Benchmarks

Speech Self-Supervised Representations Benchmarking: A Case for Larger Probing Heads

CL-MASR: A Continual Learning Benchmark for Multilingual ASR

How Should We Extract Discrete Audio Tokens from Self-Supervised Models?

DASB -- Discrete Audio and Speech Benchmark


Must Reading Papers, Research Library, Open-Source Code on Integrated Sensing and Communications (aka. Joint Radar and Communications, Joint Sensing and Communications, Dual-Functional Radar Communications)

An Overview of Signal Processing Techniques for Joint Communication and Radar Sensing

Integrated Sensing and Communications: Towards Dual-functional Wireless Networks for 6G and Beyond

Millimeter-Wave Mobile Sensing and Environment Mapping: Models, Algorithms and Validation


10th Anniversary Edition (Not endorsed by Nintendo)

Evolving Mario Levels in the Latent Space of a Deep Convolutional Generative Adversarial Network

Illuminating Mario Scenes in the Latent Space of a Generative Adversarial Network

Intentional Computational Level Design

Experience-Driven PCG via Reinforcement Learning: A Super Mario Bros Study

Deep Surrogate Assisted Generation of Environments

Generating levels that teach mechanics

International Conference on Foundations of Digital Games

Procedural content generation using neuroevolution and novelty search for diverse video game levels

Proceedings of the Genetic and Evolutionary Computation Conference

Interactive Explanations: Diagnosis and Repair of Reinforcement Learning Based Agent Behaviors

Generating Game Levels of Diverse Behaviour Engagement

Hybrid Encoding for Generating Large Scale Game Level Patterns With Local Variations


A license friendly NGC/IC objects database

The DESI Bright Galaxy Survey: Final Target Selection, Design, and Validation

Preliminary Target Selection for the DESI Bright Galaxy Survey (BGS)

Cross-correlation of Planck CMB lensing with DESI-like LRGs

Characterizing the target selection pipeline for the Dark Energy Spectroscopic Instrument Bright Galaxy Survey

Siena Galaxy Atlas 2020

A Search for Wandering Black Holes in the Milky Way with Gaia and DECaLS


Will Big Data Close the Missing Heritability Gap?

Increased Proportion of Variance Explained and Prediction Accuracy of Survival of Breast Cancer Patients with Use of Whole-Genome Multiomic Profiles

Multitrait Bayesian shrinkage and variable selection models with the BGLR-R package

Obesity, adipokines, and C-peptide are associated with distinct plasma phospholipid profiles in adult males, an untargeted lipidomic approach

Genomic mating in outbred species: predicting cross usefulness with additive and total genetic covariance matrices

Multi-trait genomic-enabled prediction enhances accuracy in multi-year wheat breeding trials

Approximate Genome-Based Kernel Models for Large Data Sets Including Main Effects and Interactions

Evaluation of Bayesian alphabet and GBLUP based on different marker density for genomic prediction in Alpine Merino sheep

Bayesian multitrait kernel methods improve multienvironment genome-based prediction

Multi‐trait genomic selection improves the prediction accuracy of end‐use quality traits in hard winter wheat


HotNet2 is an algorithm for finding significantly altered subnetworks in a large gene interaction network

Integrative epigenetic taxonomy of primary prostate cancer

Gene and Network Analysis of Common Variants Reveals Novel Associations in Multiple Complex Diseases

Predicting links between tumor samples and genes using 2-Layered graph based diffusion approach

Boosting GWAS using biological networks: A study on susceptibility to familial breast cancer

Biological networks and GWAS: comparing and combining network methods to understand the genetics of familial breast cancer susceptibility in the GENESIS study


5,400,000+ Unsplash images made available for research and machine learning

Generative Multimodal Models are In-Context Learners

Making LLaMA SEE and Draw with SEED Tokenizer

Planting a SEED of Vision in Large Language Model

Contrastive Language-Image Pre-training for the Italian Language

SEED-X: Multimodal Models with Unified Multi-granularity Comprehension and Generation

FairyTailor: A Multimodal Generative Framework for Storytelling

SEED-Data-Edit Technical Report: A Hybrid Dataset for Instructional
  Image Editing

Strategic Behavior and AI Training Data

CV-VAE: A Compatible Video VAE for Latent Generative Video Models


Protégé plugin for creating OWL ontologies from spreadsheets

An Indoor Navigation Methodology for Mobile Devices by Integrating Augmented Reality and Semantic Web

A Comprehensive Fuzzy Ontology-Based Decision Support System for Alzheimer’s Disease Diagnosis

Ontology-based decision tree model for prediction in a manufacturing network

The African wildlife ontology tutorial ontologies

Semantic Description of Plant Phenological Development Stages, Starting with Grapevine

HL7-FHIR-Based ContSys Formal Ontology for Enabling Continuity of Care Data Interoperability

An Approach to Discovery of Customer Profiles

RESEARCH AND PRACTICAL ISSUES OF ENTERPRISE INFORMATION SYSTEMS, 10TH IFIP WG 8.9 WORKING CONFERENCE, CONFENIS 2016

The African Wildlife Ontology tutorial ontologies: requirements, design, and content


A toolbox of scene text super-resolution and recognition

Scene Text Telescope: Text-Focused Scene Image Super-Resolution

Zero-Shot Chinese Character Recognition with Stroke-Level Decomposition

Text Gestalt: Stroke-Aware Scene Text Image Super-Resolution

Chinese Character Recognition with Augmented Character Profile Matching

Proceedings of the 30th ACM International Conference on Multimedia

Chinese Text Recognition with A Pre-Trained CLIP-Like Model Through Image-IDS Aligning

Weakly-Supervised Text Instance Segmentation

Scene Text Segmentation with Text-Focused Transformers

Proceedings of the 31st ACM International Conference on Multimedia

Orientation-Independent Chinese Text Recognition in Scene Images

EAFormer: Scene Text Segmentation with Edge-Aware Transformers


Explainable AI in Julia.

"Why Should I Trust You?": Explaining the Predictions of Any Classifier

Learning Important Features Through Propagating Activation Differences

Learning how to explain neural networks: PatternNet and PatternAttribution


SincNet is a neural architecture for efficiently processing raw audio samples.

LEAF: A Learnable Frontend for Audio Classification

Universal Adversarial Perturbations Generative Network for Speaker Recognition

Interpretable Convolutional Filters with SincNet

Detecting Spoofing Attacks Using VGG and SincNet: BUT-Omilia Submission to ASVspoof 2019 Challenge

Study of Pre-processing Defenses against Adversarial Attacks on State-of-the-art Speaker Recognition Systems

Speech and Speaker Recognition from Raw Waveform with SincNet

Tune-In: Training Under Negative Environments with Interference for Attention Networks Simulating Cocktail Party Effect

On the Exploitability of Audio Machine Learning Pipelines to Surreptitious Adversarial Examples

Robust Raw Waveform Speech Recognition Using Relevance Weighted Representations


Unreal environments for reinforcement learning

A Survey on Human-aware Robot Navigation

Coordinate-Aligned Multi-Camera Collaboration for Active Multi-Object Tracking

Games for Artificial Intelligence Research: A Review and Perspectives

Towards Active Vision for Action Localization with Reactive Control and Predictive Learning


FoLiA Linguistic Annotation Tool -- Flat is a web-based linguistic annotation environment based around the FoLiA format (http://proycon.github.io/folia), a rich XML-based format for linguistic annotation. Flat allows users to view annotated FoLiA documents and enrich these documents with new annotations, a wide variety of linguistic annotation types is supported through the FoLiA paradigm.

An extensive review of tools for manual annotation of documents

The PARSEME Shared Task on Automatic Identification of Verbal Multiword Expressions

Proceedings of the 13th Workshop on Multiword Expressions (MWE 2017)

UCCAApp: Web-application for Syntactic and Semantic Phrase-based Annotation

PROCEEDINGS OF THE 55TH ANNUAL MEETING OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS (ACL 2017): SYSTEM DEMONSTRATIONS

A French corpus annotated for multiword expressions and named entities

FITAnnotator: A Flexible and Intelligent Text Annotation System

North American Chapter of the Association for Computational Linguistics

Event Coreference Resolution for Contentious Politics Events

@PhilosTEI: Building Corpora for Philosophers

Extending TextAE for annotation of non-contiguous entities


Science Parse parses scientific papers (in PDF form) and returns them in structured form.

SciBERT: A Pretrained Language Model for Scientific Text

CORD-19: The COVID-19 Open Research Dataset

Construction of the Literature Graph in Semantic Scholar

A Dataset of Peer Reviews (PeerRead): Collection, Insights and NLP Applications

Can We Automate Scientific Reviewing?

The Semantic Scholar Open Data Platform

Machine Learning vs. Rules and Out-of-the-Box vs. Retrained: An Evaluation of Open-Source Bibliographic Reference and Citation Parsers

A Summarization System for Scientific Documents

DeepSentiPeer: Harnessing Sentiment in Review Texts to Recommend Peer Review Decisions

TalkSumm: A Dataset and Scalable Annotation Method for Scientific Paper Summarization Based on Conference Talks


LaTeX labels in Mathematica

A recipe for echoes from exotic compact objects

Relativistic corrections to exclusive x(cJ) + gamma production from e(+)e(-) annihilation

Leading order corrections to the Bethe-Heitler process in the γp→l+l−p reaction

Soft-photon corrections to the Bethe-Heitler process in the γp→l+l−p reaction


Non-parametric Entropy Estimation Toolbox

Efficient Estimation of Mutual Information for Strongly Dependent Variables

Precise excitation-inhibition balance controls gain and timing in the hippocampus

f-IRL: Inverse Reinforcement Learning via State Marginal Matching

Machine Learning-Based Early Detection of IoT Botnets Using Network-Edge Traffic

Doing the impossible: Why neural networks can be trained at all

Tensor networks and efficient descriptions of classical data

Tight Mutual Information Estimation With Contrastive Fenchel-Legendre Optimization

Sufficiency of a Gaussian power spectrum likelihood for accurate cosmology from upcoming weak lensing surveys

Monthly Notices of the Royal Astronomical Society

TESS Data for Asteroseismology (T'DA) Stellar Variability Classification
  Pipeline: Set-Up and Application to the Kepler Q9 Data

Privacy-Preserving Distributed Expectation Maximization for Gaussian Mixture Model Using Subspace Perturbation

IEEE International Conference on Acoustics, Speech, and Signal Processing


BGC Detection and Classification Using Deep Learning

A deep learning genome-mining strategy for biosynthetic gene cluster prediction

Genome Mining as an Alternative Way for Screening the Marine Organisms for Their Potential to Produce UV-Absorbing Mycosporine-like Amino Acid

Supporting supervised learning in fungal Biosynthetic Gene Cluster discovery: new benchmark datasets

IEEE International Conference on Bioinformatics and Biomedicine


A Large Dataset to Train Convolutional Networks for Disparity, Optical Flow, and Scene Flow Estimation

Pyramid Stereo Matching Network

GA-Net: Guided Aggregation Net for End-to-end Stereo Matching

FADNet: A Fast and Accurate Network for Disparity Estimation

FADNet++: Real-Time and Accurate Disparity Estimation with Configurable Networks


Code Release for MViTv2 on Image Recognition.

Multiscale Vision Transformers

MViTv2: Improved Multiscale Vision Transformers for Classification and Detection

Reversible Vision Transformers

Bringing Image Scene Structure to Video via Frame-Clip Consistency of Object Tokens

PromptonomyViT: Multi-Task Prompt Learning Improves Video Transformers using Synthetic Scene Data

Visual Concept Connectome (VCC): Open World Concept Discovery and their
  Interlayer Connections in Deep Models


Minimal implementation of clipped objective Proximal Policy Optimization (PPO) in PyTorch

Proximal Policy Optimization Algorithms

Hybrid discrete-continuous compilation of trapped-ion quantum circuits with deep reinforcement learning

Plan-Based Relaxed Reward Shaping for Goal-Directed Tasks

Goal-Oriented Next Best Activity Recommendation using Reinforcement Learning

Learning Equational Theorem Proving

Probabilistic Model Checking of Stochastic Reinforcement Learning Policies

HARL: Hierarchical Adaptive Reinforcement Learning Based Auto Scheduler for Neural Networks

Assessing the Impact of Distribution Shift on Reinforcement Learning
  Performance


Creative Commons Attribution 4.0 International

A collection of task-specific NLU datasets

Efficient Intent Detection with Dual Sentence Encoders

Benchmarking Natural Language Understanding Services for building Conversational Agents

Span-ConveRT: Few-shot Span Extraction for Dialog with Pretrained Conversational Representations

Intent Mining from past conversations for conversational agent

Stable LM 2 1.6B Technical Report

NLU++: A Multi-Label, Slot-Rich, Generalisable Dataset for Natural Language Understanding in Task-Oriented Dialogue

Breaking the Bank with ChatGPT: Few-Shot Text Classification for Finance

Unsupervised Layer-wise Score Aggregation for Textual OOD Detection

Split-and-Denoise: Protect large language model inference with local differential privacy


Python package for calculating reference/potential evapotranspiration (ETo).

Robust Vegetation Parameterization for Green Roofs in the EPA Stormwater Management Model (SWMM)


TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or lost.

Towards complete and error-free genome assemblies of all vertebrate species

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms

Contradictory Phylogenetic Signals in the Laurasiatheria Anomaly Zone

The pale spear‐nosed bat: A neuromolecular and transgenic model for vocal learning

Annals of the New York Academy of Sciences


More than a hundred strange attractors

Datasheets for Datasets

Chaos as an interpretable benchmark for forecasting and data-driven modelling

Learning Dynamical Systems from Data: A Simple Cross-Validation Perspective, Part V: Sparse Kernel Flows for 132 Chaotic Dynamical Systems

Model scale versus domain knowledge in statistical forecasting of chaotic systems

Machine Learning for predicting chaotic systems


rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing.


Explainable AI framework for data scientists. Explain & debug any blackbox machine learning model with a single line of code. We are looking for co-authors to take this project forward. Reach out @ ms8909@nyu.edu


Tools for generating mini-ImageNet dataset and processing batches

Model-Agnostic Meta-Learning for Fast Adaptation of Deep Networks

TADAM: Task dependent adaptive metric for improved few-shot learning

Meta-Transfer Learning for Few-Shot Learning

ImageNet Large Scale Visual Recognition Challenge

Adversarial Generation of Continuous Images

Adaptive Dimension Reduction and Variational Inference for Transductive Few-Shot Classification

PAC Prediction Sets for Meta-Learning

Rapid-INR: Storage Efficient CPU-free DNN Training Using Implicit Neural Representation


This repository has been moved. The new location is in https://github.com/TexasInstruments/edgeai-tensorlab

Path Aggregation Network for Instance Segmentation

CSPNet: A New Backbone that can Enhance Learning Capability of CNN

YOLOX: Exceeding YOLO Series in 2021

YOLO-Pose: Enhancing YOLO for Multi Person Pose Estimation Using Object Keypoint Similarity Loss

YOLO-6D-Pose: Enhancing YOLO for Single-Stage Monocular Multi-Object 6D Pose Estimation


Automated generation of NASA ADS bibtex entries directly from citation keys in your TeX source files

Beyond assembly bias: exploring secondary halo biases for cluster-size haloes

First Results from SMAUG: Characterization of Multiphase Galactic Outflows from a Suite of Local Star-forming Galactic Disk Simulations

Efficiently Cooled Stellar Wind Bubbles in Turbulent Clouds. I. Fractal Theory and Application to Star-forming Clouds

Turbulent Gas in Lensed Planck-selected Starbursts at z ∼ 1–3.5

Dark energy survey year 3 results: cosmological constraints from the analysis of cosmic shear in harmonic space

A Framework for Multiphase Galactic Wind Launching Using TIGRESS

Star Formation Laws and Efficiencies across 80 Nearby Galaxies

Milky Way Satellite Census. IV. Constraints on Decaying Dark Matter from Observations of Milky Way Satellite Galaxies

Simulating intergalactic gas for DESI-like small scale Lymanα forest observations

Journal of Cosmology and Astroparticle Physics

Phase-Space Correlations Among Systems of Satellite Galaxies


Deepfake Text Detection in the Wild

GPT-who: An Information Density-based Machine-Generated Text Detector


A scalable high-throughput metabolic and biogeochemical functional trait profiler

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems

METABOLIC: High-throughput profiling of microbial genomes for functional traits, biogeochemistry, and community-scale metabolic networks

Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics

Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)

Soils and sediments host novel archaea with divergent monooxygenases implicated in ammonia oxidation


Hopfield Networks is All You Need

Attention-based Deep Multiple Instance Learning

Hopfield Networks is All You Need

Selected aspects of complex, hypercomplex and fuzzy neural networks


Data repository of Project Coswara

Coswara - A Database of Breathing, Cough, and Voice Sounds for COVID-19 Diagnosis

The COUGHVID crowdsourcing dataset: A corpus for the study of large-scale cough analysis algorithms

Zenodo (CERN European Organization for Nuclear Research)

COVID-19 open source data sets: a comprehensive survey

DiCOVA Challenge: Dataset, task, and baseline system for COVID-19 diagnosis using acoustics

Machine learning for detecting COVID-19 from cough sounds: An ensemble-based MCDM method

Exploring the Use of Artificial Intelligence Techniques to Detect the Presence of Coronavirus Covid-19 Through Speech and Voice Analysis

IEEE access : practical innovations, open solutions

AI-Based human audio processing for COVID-19: A comprehensive overview

Pay attention to the speech: COVID-19 diagnosis using machine learning and crowdsourced respiratory and speech recordings

Exploring Self-Supervised Representation Ensembles for COVID-19 Cough Classification

A cognitive IoT-based framework for effective diagnosis of COVID-19 using multimodal data

Biomedical signal processing and control


A python wrapper for Speech Signal Processing Toolkit (SPTK).

Learning Problem-agnostic Speech Representations from Multiple Self-supervised Tasks

ConvS2S-VC: Fully convolutional sequence-to-sequence voice conversion

PriorGrad: Improving Conditional Denoising Diffusion Models with Data-Dependent Adaptive Prior

Many-to-Many Voice Transformer Network

Surfboard: Audio Feature Extraction for Modern Machine Learning

Nonparallel Voice Conversion With Augmented Classifier Star Generative Adversarial Networks

TalkNet: Non-Autoregressive Depth-Wise Separable Convolutional Model for Speech Synthesis

Learning and controlling the source-filter representation of speech with a variational autoencoder

Crossmodal Voice Conversion


WeatherBench: A benchmark dataset for data-driven weather forecasting

Journal of Advances in Modeling Earth Systems

Data‐Driven Medium‐Range Weather Prediction With a Resnet Pretrained on Climate Simulations: A New Model for WeatherBench

Forecasting Global Weather with Graph Neural Networks

WeatherBench 2: A benchmark for the next generation of data-driven global weather models

Chronos: Learning the Language of Time Series

Towards physics-inspired data-driven weather forecasting: integrating data assimilation with a deep spatial-transformer-based U-NET in a case study with ERA5

Towards physically consistent data-driven weather forecasting: Integrating data assimilation with equivariance-preserving deep spatial transformers

WeatherBench Probability: A benchmark dataset for probabilistic medium-range weather forecasting along with deep learning baseline models

Purely data-driven medium-range weather forecasting achieves comparable skill to physical models at similar resolution

Physics-inspired adaptions to low-parameter neural network weather forecasts systems


Python package to generate Gaussian (1/f)**beta noise (e.g. pink noise)

Discriminating chaotic and stochastic time series using permutation entropy and artificial neural networks

Periodic Variability in gamma-ray Emitting Blazars with Fermi-LAT

A direct method to detect deterministic and stochastic properties of data

Evaluating Temporal Correlations in Time Series Using Permutation Entropy, Ordinal Probabilities and Machine Learning

Two-qubit sweet spots for capacitively coupled exchange-only spin qubits

Permutation entropy and complexity analysis of large-scale solar wind structures and streams


Learning to Detect and Track Visible and Occluded Body Joints in a Virtual World

Recent Advances of Monocular 2D and 3D Human Pose Estimation: A Deep Learning Perspective

A Survey on Human-aware Robot Navigation

Vision-Based Human Pose Estimation via Deep Learning: A Survey

IEEE Transactions on Human-Machine Systems


Hands-On Image Generation with TensorFlow 2.0, published by Packt

Image-to-Image Translation with Conditional Adversarial Networks

Unpaired Image-to-Image Translation using Cycle-Consistent Adversarial Networks

Progressive Growing of GANs for Improved Quality, Stability, and Variation

Large Scale GAN Training for High Fidelity Natural Image Synthesis

Arbitrary Style Transfer in Real-time with Adaptive Instance Normalization

Self-Attention Generative Adversarial Networks

A Neural Algorithm of Artistic Style

Semantic Image Synthesis with Spatially-Adaptive Normalization

Toward Multimodal Image-to-Image Translation


Text tokenization and sentence segmentation (segtok v2)

PySBD: Pragmatic Sentence Boundary Disambiguation

Findings of the WMT 2019 Biomedical Translation Shared Task: Evaluation for MEDLINE Abstracts and Biomedical Terminologies

Proceedings of the Fourth Conference on Machine Translation (Volume 3: Shared Task Papers, Day 2)

Unsupervised Bitext Mining and Translation via Self-trained Contextual Embeddings

Evaluation of Scientific Elements for Text Similarity in Biomedical Publications

Meeting of the Association for Computational Linguistics

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set

HAL (Le Centre pour la Communication Scientifique Directe)

Supporting Land Reuse of Former Open Pit Mining Sites using Text Classification and Active Learning

Identifying Corporate Credit Risk Sentiments from Financial News

Proceedings of the 2022 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies: Industry Track

From Dataset Recycling to Multi-Property Extraction and Beyond

Psycholinguistic dataset on language use in 1145 novels published in English and Dutch


GLIGEN: Open-Set Grounded Text-to-Image Generation

Directed Diffusion: Direct Control of Object Placement through Attention Guidance

VideoDirectorGPT: Consistent Multi-scene Video Generation via LLM-Guided Planning

Kandinsky: an Improved Text-to-Image Synthesis with Image Prior and Latent Diffusion

LLaVA-Interactive: An All-in-One Demo for Image Chat, Segmentation, Generation and Editing

DiagrammerGPT: Generating Open-Domain, Open-Platform Diagrams via LLM Planning

DiffUHaul: A Training-Free Method for Object Dragging in Images


Deep Learning Energy Measurement and Optimization

Zeus: Understanding and Optimizing GPU Energy Consumption of DNN Training

Reducing Energy Bloat in Large Model Training

Chasing Low-Carbon Electricity for Practical and Sustainable DNN Training


EdgeConnect: Structure Guided Image Inpainting using Edge Prediction, ICCV  2019 https://arxiv.org/abs/1901.00212

EdgeConnect: Generative Image Inpainting with Adversarial Edge Learning

Flow-edge Guided Video Completion

Diverse Image Inpainting with Bidirectional and Autoregressive Transformers

Deep Fusion Network for Image Completion

Learning a Sketch Tensor Space for Image Inpainting of Man-made Scenes

Automatic Segmentation and Visualization of Choroid in OCT with Knowledge Infused Deep Learning

IEEE journal of biomedical and health informatics

LaFIn: Generative Landmark Guided Face Inpainting

Iterative facial image inpainting based on an encoder-generator architecture

Pluralistic Image Completion with Probabilistic Mixture-of-Experts


dataset for lightly supervised training using the librivox audio book recordings. https://librivox.org/.

Libri-Light: A Benchmark for ASR with Limited or No Supervision

International Conference on Acoustics, Speech, and Signal Processing

MLS: A Large-Scale Multilingual Dataset for Speech Research

TERA: Self-Supervised Learning of Transformer Encoder Representation for Speech

IEEE/ACM Transactions on Audio, Speech, and Language Processing

SLAM: A Unified Encoder for Speech and Language Modeling via Speech-Text Joint Pre-Training

Utilizing Self-supervised Representations for MOS Prediction

Guided-TTS 2: A Diffusion Model for High-quality Adaptive Text-to-Speech with Untranscribed Data

Large-Scale Self- and Semi-Supervised Learning for Speech Translation

Magic Dust for Cross-Lingual Adaptation of Monolingual Wav2vec-2.0

Libriheavy: a 50,000 hours ASR corpus with punctuation casing and context

Improving Continuous Sign Language Recognition with Cross-Lingual Signs


PCSim: LiDAR Point Cloud Simulation and Sensor Placement! Code of [ICRA 2023] "Analyzing Infrastructure LiDAR Placement with Realistic LiDAR Simulation Library" and [ICCV 2023] "Optimizing the Placement of Roadside LiDARs for Autonomous Driving".

ReSimAD: Zero-Shot 3D Domain Transfer for Autonomous Driving with Source Reconstruction and Target Simulation

Realistic Rainy Weather Simulation for LiDARs in CARLA Simulator


UrbanNav: an Open-Sourcing Localization Data Collected in Asian Urban Canyons, Including Tokyo and Hong Kong

3D LiDAR Aided GNSS NLOS Mitigation in Urban Canyons

Time-Correlated Window-Carrier-Phase-Aided GNSS Positioning Using Factor Graph Optimization for Urban Positioning

PPPLib: An open-source software for precise point positioning using GPS, BeiDou, Galileo, GLONASS, and QZSS with multi-frequency observations

Simulation Experiment and Analysis of GNSS/INS/LEO/5G Integrated Navigation Based on Federated Filtering Algorithm

Coarse-to-Fine Loosely-Coupled LiDAR-Inertial Odometry for Urban Positioning and Mapping

3D Vision Aided GNSS Real-Time Kinematic Positioning for Autonomous Systems in Urban Canyons

NAVIGATION: Journal of the Institute of Navigation

An Algorithm to Assist the Robust Filter for Tightly Coupled RTK/INS Navigation System


Objective-Reinforced Generative Adversarial Networks (ORGAN) for Sequence Generation Models

ChemGAN challenge for drug discovery: can AI reproduce natural chemical diversity?

Can AI reproduce observed chemical diversity?


Machine Learning inference engine for Microcontrollers and Embedded devices

LPWAN and Embedded Machine Learning as Enablers for the Next Generation of Wearable Devices

DNN Is Not All You Need: Parallelizing Non-neural ML Algorithms on Ultra-low-power IoT Processors

Are Microcontrollers Ready for Deep Learning-Based Human Activity Recognition?

TinyML-Based Fall Detection for Connected Personal Mobility Vehicles

Computers, materials & continua/Computers, materials & continua (Print)

An Open-Source Tool for Classification Models in Resource-Constrained Hardware


zoofs is a python library for performing feature selection using a variety of nature-inspired wrapper algorithms. The algorithms range from swarm-intelligence to physics-based to Evolutionary. It's easy to use , flexible and powerful tool to reduce your feature size.

Binary grey wolf optimization approaches for feature selection

An improved Dragonfly Algorithm for feature selection

Binary Harris Hawks Optimizer for High-Dimensional, Low Sample Size Feature Selection

EVOLUTIONARY MACHINE LEARNING TECHNIQUES: ALGORITHMS AND APPLICATIONS

Feature selection through gravitational search algorithm

Overview of Particle Swarm Optimisation for Feature Selection in Classification

Total organic carbon estimation in seagrass beds in Tauranga Harbour, New Zealand using multi-sensors imagery and grey wolf optimization


[ICDE'20] ⚖ A general, efficient ensemble framework for imbalanced classification. | 泛用，高效，鲁棒的类别不平衡学习框架

Self-paced Ensemble for Highly Imbalanced Massive Data Classification

MESA: Boost Ensemble Imbalanced Learning with MEta-SAmpler

Cross-Hospital Sepsis Early Detection via Semi-Supervised Optimal Transport With Self-Paced Ensemble

GTF: An Adaptive Network Anomaly Detection Method at the Network Edge

Semi-supervised Optimal Transport with Self-paced Ensemble for Cross-hospital Sepsis Early Detection.


Extract video features from raw videos using multiple GPUs. We support RAFT flow frames as well as S3D, I3D, R(2+1)D, VGGish, CLIP, and TIMM models.

Multi-modal Dense Video Captioning

A Better Use of Audio-Visual Cues: Dense Video Captioning with Bi-modal Transformer

Taming Visually Guided Sound Generation

VGMShield: Mitigating Misuse of Video Generative Models

A MIL Approach for Anomaly Detection in Surveillance Videos from Multiple Camera Views


The official repository for ROOT: analyzing, storing and visualizing big data, scientifically

A FAIR and AI-ready Higgs boson decay dataset

Modeling protein dynamics in Caenorhabditis elegans embryos reveals that the PLK-1 gradient relies on weakly coupled reaction–diffusion mechanisms

Proceedings of the National Academy of Sciences of the United States of America

C++ Code Generation for Fast Inference of Deep Learning Models in ROOT/TMVA

Integration and Performance of New Technologies in the CMS Simulation

Extending ROOT through Modules

GPU propagation and visualisation of particle collisions with accurate model of ALICE detector magnetic field

The ALICE Analysis Framework for LHC Run 3

Energy reconstruction of the ATLAS Tile Calorimeter under high pile-up conditions using the Wiener filter


SUPPA: Fast quantification of splicing and differential splicing

The Functional Impact of Alternative Splicing in Cancer

The changing paradigm of intron retention: regulation, ramifications and recipes

SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

The landscape of expression and alternative splicing variation across human traits

Alternate splicing of transcripts upon Mycobacterium tuberculosis infection impacts the expression of functional protein domains

SMRT sequencing of the full-length transcriptome of the Rhynchophorus ferrugineus (Coleoptera: Curculionidae).

Identification of genes involved in chicken follicle selection by ONT sequencing on granulosa cells

The PacBio Full-Length Transcriptome of the Tea Aphid as a Reference Resource

Dissection of full-length transcriptome and metabolome of Dichocarpum (Ranunculaceae): implications in evolution of specialized metabolism of Ranunculales medicinal plants

CHD8 suppression impacts on histone H3 lysine 36 trimethylation and alters RNA alternative splicing


Lattice methods in TensorFlow

Deontological Ethics By Monotonicity Shape Constraints

Feature Necessity & Relevancy in ML Classifier Explanations

Signal Combination for Language Identification

Interpretable Set Functions


ADAHESSIAN: An Adaptive Second Order Optimizer for Machine Learning

Doubly Adaptive Scaled Algorithm for Machine Learning Using Second-Order Information


First order eccentricity transit timing variations computed in Agol & Deck (2015)

Seven temperate terrestrial planets around the nearby ultracool dwarf star TRAPPIST-1

SECURE MASS MEASUREMENTS FROM TRANSIT TIMING: 10 KEPLER EXOPLANETS BETWEEN 3 AND 8 M? WITH DIVERSE DENSITIES AND INCIDENT FLUXES

The K2-138 System: A Near-resonant Chain of Five Sub-Neptune Planets Discovered by Citizen Scientists

TRANSIT TIMING TO FIRST ORDER IN ECCENTRICITY

The Transit Timing and Atmosphere of Hot Jupiter HAT-P-37b


A Java library for bigraphical reactive systems.

Towards a Formal Model for Composable Container Systems

A CSP implementation of the bigraph embedding problem

Computing Embeddings of Directed Bigraphs


Oscar and VinVL

Oscar: Object-Semantics Aligned Pre-training for Vision-Language Tasks

VinVL: Revisiting Visual Representations in Vision-Language Models

GIT: A Generative Image-to-text Transformer for Vision and Language

Compressing Visual-linguistic Model via Knowledge Distillation

ITA: Image-Text Alignments for Multi-Modal Named Entity Recognition

MuMuQA: Multimedia Multi-Hop News Question Answering via Cross-Media Knowledge Extraction and Grounding

Foundation Models for Natural Language Processing -- Pre-trained Language Models Integrating Media

Concadia: Towards Image-Based Text Generation with a Purpose

Linking Emergent and Natural Languages via Corpus Transfer

Survey of Visual-Semantic Embedding Methods for Zero-Shot Image Retrieval


Metronome system documentation

A Survey on Blockchain Interoperability: Past, Present, and Future Trends

Sidechains and interoperability

Atomic Crosschain Transactions for Ethereum Private Sidechains

Survey of Interoperability in Electronic Health Records Management and Proposed Blockchain Based Framework: MyBlockEHR

Decentralized Cross-Blockchain Asset Transfers

Decentralized cross-blockchain asset transfers with transfer confirmation


The Model for Economic Tipping (point) Analysis

Economic impacts of melting of the Antarctic Ice Sheet


Zero-Shot Refinement of Buildings' Segmentation Models using SAM

Trainable Noise Model as an XAI evaluation method: application on Sobol for remote sensing image segmentation

Extending CAM-based XAI methods for Remote Sensing Imagery Segmentation


Scalable MCTS for team scenarios

Scalable Planning and Learning for Multiagent POMDPs

Scalable Anytime Planning for Multi-Agent MDPs

Scalable Online Planning for Multi-Agent MDPs

Journal of Artificial Intelligence Research


MRI brain extraction tool

Automated brain extraction of multisequence MRI using artificial neural networks

Accurate brain‐age models for routine clinical MRI examinations

Predicting brain-age from raw T 1 -weighted Magnetic Resonance Imaging data using 3D Convolutional Neural Networks

Lesion-Function Analysis from Multimodal Imaging and Normative Brain Atlases for Prediction of Cognitive Deficits in Glioma Patients

A Two-Stage Generative Model with CycleGAN and Joint Diffusion for MRI-based Brain Tumor Detection

Deep learning-based detection and quantification of brain metastases on black-blood imaging can provide treatment suggestions: a clinical cohort study


Nitric oxide acts as a cotransmitter in a subset of dopaminergic neurons to diversify memory dynamics

Neural Evolution of Context-Dependent Fly Song

A functionally ordered visual feature map in the Drosophila brain

Spatial readout of visual looming in the central brain of Drosophila

Neuronal circuits integrating visual motion information in Drosophila melanogaster

Transsynaptic mapping of Drosophila mushroom body output neurons

Synaptic targets of photoreceptors specialized to detect color and skylight polarization in Drosophila

Controlling motor neurons of every muscle for fly proboscis reaching

Taste quality and hunger interactions in a feeding sensorimotor circuit

Hierarchical architecture of dopaminergic circuits enables second-order conditioning in Drosophila


APT – Analysis of Petri nets and labelled transition systems

Analysis of Petri Nets and Transition Systems

AdamMC: A Model Checker for Petri Nets with Transits against Flow-LTL

A Web Interface for Petri Nets with Transits and Petri Games

Synthesis of Reduced Asymmetric Choice Petri Nets

A New Property of Choice-Free Petri Net Systems

Some Basic Techniques allowing Petri Net Synthesis: Complexity and Algorithmic Issues

Maximal and minimal dynamic Petri net slicing


Learning Transferable Visual Models From Natural Language Supervision

Teaching CLIP to Count to Ten


This repository contains the codes to reproduce the results of our proposed novelty detection algorithm based on adversarially robust autoencoder.

Adversarial examples for generative models

Adversarial Manipulation of Deep Representations

ARAE: Adversarially Robust Training of Autoencoders Improves Novelty Detection


Filter and prioritize fusion calls

Subgroup-specific structural variation across 1,000 medulloblastoma genomes

New Brain Tumor Entities Emerge from Molecular Classification of CNS-PNETs

TERT rearrangements are frequent in neuroblastoma and identify aggressive tumors

MYB-QKI rearrangements in angiocentric glioma drive tumorigenicity through a tripartite mechanism

Genomic analysis of diffuse pediatric low-grade gliomas identifies recurrent oncogenic truncating rearrangements in the transcription factor MYBL1

Fusion of TTYH1 with the C19MC microRNA cluster drives expression of a brain-specific DNMT3B isoform in the embryonal brain tumor ETMR

New Molecular Considerations for Glioma: IDH, ATRX, BRAF, TERT, H3 K27M

Current neurology and neuroscience reports

Activation of human telomerase reverse transcriptase through gene fusion in clear cell sarcoma of the kidney

Recurrent pre-existing and acquired DNA copy number alterations, including focal TERT gains, in neuroblastoma central nervous system metastases.


Identifying Historical People, Places and other Entities: Shared Task on Named Entity Recognition and Linking on Historical Newspapers at CLEF 2020.

Named Entity Recognition and Classification in Historical Documents: A Survey

Overview of CLEF HIPE 2020: Named Entity Recognition and Linking on Historical Newspapers

Survey on English Entity Linking on Wikidata

Entities, Dates, and Languages: Zero-Shot on Historical Texts with T0

Ontology Enrichment from Texts: A Biomedical Dataset for Concept Discovery and Placement


Lattice light-sheet post-processing utility.

The HOPS tethering complex is required to maintain signaling endosome identity and TORC1 activity

ER-dependent membrane repair of mycobacteria-induced vacuole damage

A phosphoinositide and RAB switch controls early macropinocytosis


Implementation of reduced-order optimal control schemes for finite element models of Soft Robots

Soft Robot Optimal Control Via Reduced Order Finite Element Models

Data-Driven Spectral Submanifold Reduction for Nonlinear Optimal Control of High-Dimensional Robots

Robust Nonlinear Reduced-Order Model Predictive Control


Python toolkit for calculating stellar limb darkening profiles and model-specific coefficients using the stellar atmosphere spectrum library by Husser et al. (2013). Described in Parviainen & Aigrain, MNRAS 453, 3821–3826 (2015).

ldtk: Limb Darkening Toolkit

Monthly Notices of the Royal Astronomical Society

K2 DISCOVERS A BUSY BEE: AN UNUSUAL TRANSITING NEPTUNE FOUND IN THE BEEHIVE CLUSTER

Warm terrestrial planet with half the mass of Venus transiting a nearby star

Multicolour photometry for exoplanet candidate validation

The discovery of WASP-151b, WASP-153b, WASP-156b: Insights on giant planet migration and the upper boundary of the Neptunian desert

Potassium detection in the clear atmosphere of a hot-Jupiter. FORS2 transmission spectroscopy of WASP-17b

MuSCAT2 multicolour validation of TESS candidates: an ultra-short-period substellar object around an M dwarf

The GTC exoplanet transit spectroscopy survey - II. An overly large Rayleigh-like feature for exoplanet TrES-3b

TWO SMALL TEMPERATE PLANETS TRANSITING NEARBY M DWARFS IN K2 CAMPAIGNS 0 AND 1

Planetary Candidates from K2 Campaign 16


Agent-based simulator for two sided urban mobility markets

Evolution of labour supply in ridesourcing

Modelling the Rise and Fall of Two-Sided Mobility Markets with Microsimulation


ProFit is a galaxy image bulge-disk decomposition program

ProFit : Bayesian profile fitting of galaxy images

The SAMI Galaxy Survey: Quenching of Star Formation in Clusters I. Transition Galaxies

Galaxy And Mass Assembly (GAMA): assimilation of KiDS into the GAMA database

Automated detectionof very low surface brightness galaxiesin the Virgo cluster

Galaxy And Mass Assembly (GAMA): bulge-disc decomposition of KiDS data in the nearby Universe

Star-forming, rotating spheroidal galaxies in the GAMA and SAMI surveys

Deep extragalactic visible legacy survey (DEVILS): the emergence of bulges and decline of disc growth since z = 1

PEARLS: Low Stellar Density Galaxies in the El Gordo Cluster Observed with JWST

PEARLS: A Potentially Isolated Quiescent Dwarf Galaxy with a Tip of the Red Giant Branch Distance of 30 Mpc

ProPane: Image Warping with Fire


CryoGrid is a one-dimensional land surface model  dedicated to simulate ground temperatures in permafrost environments.

Consequences of permafrost degradation for Arctic infrastructure – bridging the model gap between regional and engineering scales


An R Interface to the Daymet Web Services

Tracking vegetation phenology across diverse North American biomes using PhenoCam imagery

Retrieving and processing agro-meteorological data from API-client sources using R software


Python implementation of the SM2RAIN algorithm

Soil as a natural rain gauge: Estimating global rainfall from satellite soil moisture data

Journal of Geophysical Research: Atmospheres

SM2RAIN-Climate, a monthly global long-term rainfall dataset for climatological studies

SM2RAIN-ASCAT (2007-June 2020): global daily satellite rainfall from ASCAT soil moisture

Zenodo (CERN European Organization for Nuclear Research)


Computing homology of directed flag complexes (based on https://github.com/Ripser/ripser). Online version: https://homepages.abdn.ac.uk/neurotopology/flagser.html

Computing Persistent Homology of Directed Flag Complexes

Impact of higher order network structure on emergent cortical activity

Same But Different: Distance Correlations Between Topological Summaries

Complexes of Tournaments, Directionality Filtrations and Persistent Homology

MCMC Sampling of Directed Flag Complexes with Fixed Undirected Graphs


OmegaFold Release Code

xTrimoPGLM: Unified 100B-Scale Pre-trained Transformer for Deciphering the Language of Protein

The transformative power of transformers in protein structure prediction

Updated Phylogeny and Protein Structure Predictions Revise the Hypothesis on the Origin of MADS-box Transcription Factors in Land Plants

Machine Learning-Based Modeling of Olfactory Receptors in Their Inactive State: Human OR51E2 as a Case Study


IBM Environmental Intelligence Geospatial APIs SDK

Learning and Recognizing Archeological Features from LiDAR Data

Map Generation from Large Scale Incomplete and Inaccurate Data Labels

Change Detection from Remote Sensing to Guide OpenStreetMap Labeling

ISPRS International Journal of Geo-Information


Earth Engine SSEBop ET Model

Operational Evapotranspiration Mapping Using Remote Sensing and Weather Datasets: A New Parameterization for the SSEB Approach

JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION

Evaluating Landsat 8 evapotranspiration for water use mapping in the Colorado River Basin

Satellite Psychrometric Formulation of the Operational Simplified SURFACE ENERGY BALANCE (SSEBOP) MODEL FOR QUANTIFYING AND MAPPING EVAPOTRANSPIRATION

Satellite-based water use dynamics using historical Landsat data (1984-2014) in the southwestern United States

Long-Term (1986–2015) Crop Water Use Characterization over the Upper Rio Grande Basin of United States and Mexico Using Landsat-Based Evapotranspiration

Characterizing Crop Water Use Dynamics in the Central Valley of California Using Landsat-Derived Evapotranspiration


A set of deep learning models for FRB/RFI binary classification.

Faint Repetitions from a Bright Fast Radio Burst Source

FETCH: A deep-learning based classifier for fast transient classification

Burst timescales and luminosities as links between young pulsars and fast radio bursts

Extremely band-limited repetition from a fast radio burst source

Arecibo observations of a burst storm from FRB 20121102A in 2016

A Dual-band Radio Observation of FRB 121102 with the Deep Space Network and the Detection of Multiple Bursts

Multiwavelength Radio Observations of Two Repeating Fast Radio Burst Sources: FRB 121102 and FRB 180916.J0158+65

Comprehensive Analysis of a Dense Sample of FRB 121102 Bursts

Non-detection of fast radio bursts from six gamma-ray burst remnants with possible magnetar engines

Monthly notices of the Royal Astronomical Society

A Deep Targeted Search for Fast Radio Bursts from the Sites of Low-redshift Short Gamma-Ray Bursts


Potential Field Source Surface model package for Python

Magnetic Connectivity of the Ecliptic Plane within 0.5 au: Potential Field Source Surface Modeling of the First Parker Solar Probe Encounter

The Astrophysical Journal Supplement Series

Prediction and Verification of Parker Solar Probe Solar Wind Sources at 13.3 R_⊙

Constraining Global Coronal Models with Multiple Independent Observables

Test Problems for Potential Field Source Surface Extrapolations of Solar and Stellar Magnetic Fields


Wishbone is an algorithm to align cells along developmental trajectories with branches

Reversed graph embedding resolves complex single-cell trajectories

Wishbone identifies bifurcating developmental trajectories from single-cell data

BGP: identifying gene-specific branching dynamics from single-cell data with a branching Gaussian process

D-EE: Distributed software for visualizing intrinsic structure of large-scale single-cell data


R package to conduct univariate and bivariate wavelet analyses

Rainfall trends and variation in the Maasai Mara ecosystem and their implications for animal population and biodiversity dynamics

Unraveling the Transmission Ecology of Polio

Annually resolved Atlantic sea surface temperature variability over the past 2,900 y

Some coral diseases track climate oscillations in the Caribbean

Rare ground data confirm significant warming and drying in western equatorial Africa

Safe haven, hedge and diversification for African stocks: cryptocurrencies versus gold in time-frequency perspective

West Nile virus transmission potential in Portugal

Scientific drilling of Lake Chalco, Basin of Mexico (MexiDrill)

Insolation and Greenhouse Gas Forcing of the South American Monsoon System Across Three Glacial-Interglacial Cycles

Recent fire activity in the boreal eastern interior of North America is below that of the past 2000 yr


Constrained Local Search for Last-Mile Routing

Learning from Drivers to Tackle the Amazon Last Mile Routing Research Challenge


Tool for automating common video key-frame extraction, video compression and Image Auto-crop/Image-resize tasks

Video-ChatGPT: Towards Detailed Video Understanding via Large Vision and Language Models

MileBench: Benchmarking MLLMs in Long Context

Video Question Answering Using CLIP-Guided Visual-Text Attention

MMWorld: Towards Multi-discipline Multi-faceted World Model Evaluation
  in Videos


DDSL: Deep Differential Simplex Layer for Neural Networks

Towards General-Purpose Representation Learning of Polygonal Geometries

Convolutional Neural Networks on non-uniform geometrical signals using Euclidean spectral transformation

DDSL: Deep Differentiable Simplex Layer for Learning Geometric Signals


Sequence-to-sequence TTS based on Kyubyong's dc_tts

Efficiently Trainable Text-to-Speech System Based on Deep Convolutional Networks with Guided Attention

Confidence through Attention

Laughter Synthesis: Combining Seq2seq modeling with Transfer Learning

Speaker verification-derived loss and data augmentation for DNN-based multispeaker speech synthesis

Location, Location: Enhancing the Evaluation of Text-to-Speech Synthesis Using the Rapid Prosody Transcription Paradigm


Unofficial PyTorch implementation of Google AI's VoiceFilter system

VoiceFilter: Targeted Voice Separation by Speaker-Conditioned Spectrogram Masking

VoiceFilter-Lite: Streaming Targeted Voice Separation for On-Device Speech Recognition

Neural Target Speech Extraction: An Overview

Cotatron: Transcription-Guided Speech Encoder for Any-to-Many Voice Conversion without Parallel Data

X-TaSNet: Robust and Accurate Time-Domain Speaker Extraction Network

Multimodal Target Speech Separation with Voice and Face References

A Near-Real-Time Processing Ego Speech Filtering Pipeline Designed for
  Speech Interruption During Human-Robot Interaction


Error correction for Illumina RNA-seq reads

Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads

A simple guide to de novo transcriptome assembly and annotation

A resource for improved predictions of Trypanosoma and Leishmania protein three-dimensional structure

Embryonic gene transcription in the spiny mouse (Acomys cahirinus): an investigtion into the embryonic genome activation

An improved reference genome for Trifolium subterraneum L. provides insight into molecular diversity and intra-specific phylogeny


official implementation for the paper "Simplifying Graph Convolutional Networks"

Deep Learning on Graphs: A Survey

A Survey on Text Classification: From Shallow to Deep Learning

Graph-based Semi-supervised Learning: A Comprehensive Review

Scalable Graph Neural Networks via Bidirectional Propagation

Normalized Online Learning

Node Dependent Local Smoothing for Scalable Graph Learning

Multiplex Heterogeneous Graph Convolutional Network

Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining

Meta Propagation Networks for Graph Few-shot Semi-supervised Learning

Approximate Graph Propagation


A toolkit for QC and visualization of ATAC-seq results.

Quantification, Dynamic Visualization, and Validation of Bias in ATAC-Seq Data with ataqv.

BAF60a deficiency uncouples chromatin accessibility and cold sensitivity from white fat browning

Protocol for assay of transposase accessible chromatin sequencing in non-model species

Chromatin accessibility analysis uncovers regulatory element landscape in prostate cancer progression

Ovo is a master regulator of the piRNA pathway in animal ovarian germ cells


Variational quantum Gibbs state preparation with a truncated Taylor series

Variational Quantum Singular Value Decomposition

TensorCircuit: a Quantum Software Framework for the NISQ Era

Variational quantum algorithms for trace distance and fidelity estimation

VSQL: Variational Shadow Quantum Learning for Classification

Quantum Self-Attention Neural Networks for Text Classification

Practical distributed quantum information processing with LOCCNet

Quantum Artificial Intelligence for the Science of Climate Change

Concentration of Data Encoding in Parameterized Quantum Circuits

Q^2Chemistry: A quantum computation platform for quantum chemistry


LASSO for GWAS with summary statistics

Improved genetic prediction of complex traits from individual-level data or summary statistics

Genetics, leadership position, and well-being: An investigation with a large-scale GWAS

Statistical models and computational tools for predicting complex traits and diseases

Polygenic risk scores: effect estimation and model optimization

Maternal smoking DNA methylation risk score associated with health outcomes in offspring of European and South Asian ancestry

A Smoothed Version of the Lassosum Penalty for Fitting Integrated Risk Models Using Summary Statistics or Individual-Level Data

Topic modeling identifies novel genetic loci associated with multimorbidities in UK Biobank


STIX data representing MITRE ATT&CK

Towards automation of threat modeling based on a semantic model of attack patterns and weaknesses

Enhancing the STIX Representation of MITRE ATT&CK for Group Filtering and Technique Prioritization

Attackers reveal their arsenal: An investigation of adversarial techniques in CTI reports


Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study

Household transmission of COVID-19 cases associated with SARS-CoV-2 delta variant (B.1.617.2): national case-control study

Tracking SARS-CoV-2 mutations and variants through the COG-UK-Mutation Explorer

Effectiveness of ChAdOx1-S COVID-19 booster vaccination against the Omicron and Delta variants in England

CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay

A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing

Real-time monitoring and analysis of SARS-CoV-2 nanopore sequencing with minoTour


Securify v2.0

Smart Contract Vulnerability Detection Technique: A Survey

Turn the Rudder: A Beacon of Reentrancy Detection for Smart Contracts on Ethereum

Gas Gauge: A Security Analysis Tool for Smart Contract Out-of-Gas Vulnerabilities

DAppSCAN: Building Large-Scale Datasets for Smart Contract Weaknesses in DApp Projects

Combatting Front-Running in Smart Contracts: Attack Mining, Benchmark Construction and Vulnerability Detector Evaluation

TokenHook: Secure ERC-20 smart contract

Definition and Detection of Defects in NFT Smart Contracts

OpenSCV: An Open Hierarchical Taxonomy for Smart Contract Vulnerabilities

A Mapping Review on Cyber-Physical Smart Contracts: Architectures, Platforms, and Challenges

Uncover the Premeditated Attacks: Detecting Exploitable Reentrancy Vulnerabilities by Identifying Attacker Contracts


Indonesian stemmer. Python port of PHP Sastrawi project.

Multi-label Hate Speech and Abusive Language Detection in Indonesian Twitter

THIRD WORKSHOP ON ABUSIVE LANGUAGE ONLINE

Clickbait Headline Detection in Indonesian News Sites using Multilingual Bidirectional Encoder Representations from Transformers (M-BERT)

Aspect-based Sentiment Analysis on Indonesia’s Tourism Destinations Based on Google Maps User Code-Mixed Reviews (Study Case: Borobudur and Prambanan Temples)

Pacific Asia Conference on Language, Information, and Computation

Implementation of Stacking Ensemble Classifier for Multi-class Classification of COVID-19 Vaccines Topics on Twitter

Topic Modeling of Online Media News Titles during COVID-19 Emergency Response in Indonesia Using the Latent Dirichlet Allocation (LDA) Algorithm

A stance dataset with aspect-based sentiment information from Indonesian COVID-19 vaccination-related tweets

Knowing Right from Wrong: Should We Use More Complex Models for Automatic Short-Answer Scoring in Bahasa Indonesia?

Empirical Methods in Natural Language Processing


Pretraining, fine-tuning and evaluation scripts for Indic-Wav2Vec2

Effectiveness of Mining Audio and Text Pairs from Public Data for Improving ASR Systems for Low-Resource Languages

Predicting positive transfer for improved low-resource speech
  recognition using acoustic pseudo-tokens


Code for TKDE paper "Self-supervised learning on graphs: Contrastive, generative, or predictive"

GPT-GNN: Generative Pre-Training of Graph Neural Networks

Self-Supervised Learning on Graphs: Contrastive, Generative, or Predictive

Pre-Training Graph Neural Networks for Cold-Start Users and Items Representation


This repo contains source code and materials for the TEmporally COherent GAN SIGGRAPH project.

Learning temporal coherence via self-supervision for GAN-based video generation

Video Super Resolution Based on Deep Learning: A Comprehensive Survey

Temporally Coherent GANs for Video Super-Resolution (TecoGAN).


Behavior Trees Library for ROS (Robot Operating System). In C++ and python

Behavior Trees in Robotics and AI: An Introduction

A Survey of Behavior Trees in Robotics and AI

Behavior trees in action: a study of robotics applications

Behavior Trees and State Machines in Robotics Applications

Behavior Trees as a Representation for Medical Procedures

Replication package for article: Behavior Trees in Action: A Study of Robotics Applications

Hidden Markov Models derived from Behavior Trees


Obtain Word Alignments using Pretrained Language Models (e.g., mBERT)

SimAlign: High Quality Word Alignments without Parallel Training Data using Static and Contextualized Embeddings

MLQE-PE: A Multilingual Quality Estimation and Post-Editing Dataset

Analyzing the Mono- and Cross-Lingual Pretraining Dynamics of Multilingual Language Models

Investigating the Reordering Capability in CTC-based Non-Autoregressive End-to-End Speech Translation

Automatic Generation of Distractors for Fill-in-the-Blank Exercises with Round-Trip Neural Machine Translation

Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics: Student Research Workshop

Can Synthetic Translations Improve Bitext Quality?

Using Neural Machine Translation for Generating Diverse Challenging Exercises for Language Learner

Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)

A Case Study on the Importance of Named Entities in a Machine Translation Pipeline for Customer Support Content

European Association for Machine Translation Conferences/Workshops

Does mBERT understand Romansh? Evaluating word embeddings using word alignment


Neighborhood Attention Extension. Bringing attention to a neighborhood near you!

Neighborhood Attention Transformer

Dilated Neighborhood Attention Transformer

All-in-One Metrical and Functional Structure Analysis with Neighborhood Attentions on Demixed Audio

AgileFormer: Spatially Agile Transformer UNet for Medical Image
  Segmentation

Faster Neighborhood Attention: Reducing the O(n^2) Cost of Self
  Attention at the Threadblock Level


Convolutions for Sequence Modeling

Hungry Hungry Hippos: Towards Language Modeling with State Space Models

Hyena Hierarchy: Towards Larger Convolutional Language Models

Simple Hardware-Efficient Long Convolutions for Sequence Modeling

Zoology: Measuring and Improving Recall in Efficient Language Models

Simple linear attention language models balance the recall-throughput
  tradeoff

MIMONets: Multiple-Input-Multiple-Output Neural Networks Exploiting Computation in Superposition

Efficient Classification of Long Documents via State-Space Models

Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing


a library to measure the python energy consumption of python code

GNNear: Accelerating Full-Batch Training of Graph Neural Networks with Near-Memory Processing

Energon: Towards Efficient Acceleration of Transformers Using Dynamic Sparse Attention

Energy-Efficient and Federated Meta-Learning via Projected Stochastic Gradient Ascent


Reluplex: An Efficient SMT Solver for Verifying Deep Neural Networks

A Unified View of Piecewise Linear Neural Network Verification

Branch and Bound for Piecewise Linear Neural Network Verification

Verification for Machine Learning, Autonomy, and Neural Networks Survey

Quantifying safety risks of deep neural networks

Towards the Quantification of Safety Risks in Deep Neural Networks


Well tested & Multi-language evaluation framework for text summarization.

Improving Truthfulness of Headline Generation

Global Optimization under Length Constraint for Neural Text Summarization

Meeting of the Association for Computational Linguistics


A wide variety of research projects developed by the SpokenNLP team of Speech Lab, Alibaba Group.

BERT for Joint Intent Classification and Slot Filling

Sequence Model with Self-Adaptive Sliding Window for Efficient Spoken Document Segmentation

Loss Masking Is Not Needed In Decoder-Only Transformer For Discrete-Token-Based ASR

MUG: A General Meeting Understanding and Generation Benchmark

Improving Long Document Topic Segmentation Models With Enhanced Coherence Modeling


[NeurIPS 2023] Offical code for <Real3D-AD: A Dataset of Point Cloud Anomaly Detection>. A 3D point cloud anomaly detection dataset and benchmark.

Complementary Pseudo Multimodal Feature for Point Cloud Anomaly Detection

PointCore: Efficient Unsupervised Point Cloud Anomaly Detector Using
  Local-Global Features


Official implementation of Earthformer

Earthformer: Exploring Space-Time Transformers for Earth System Forecasting

PreDiff: Precipitation Nowcasting with Latent Diffusion Models


:atom_symbol: Qiskit (Quantum Information Science Kit) for JavaScript

Overview and Comparison of Gate Level Quantum Software Platforms

Open source software in quantum computing

Quantum Computing: an undergraduate approach using Qiskit

QAC: Quantum-computing Aided Composition


Model API for GALACTICA

Galactica: A Large Language Model for Science

ChatGPT versus Traditional Question Answering for Knowledge Graphs: Current Status and Future Directions Towards Knowledge Graph Chatbots

LlaSMol: Advancing Large Language Models for Chemistry with a
  Large-Scale, Comprehensive, High-Quality Instruction Tuning Dataset

Leveraging Biomolecule and Natural Language through Multi-Modal
  Learning: A Survey

Appraising the Potential Uses and Harms of LLMs for Medical Systematic Reviews


Zero-1-to-3: Zero-shot One Image to 3D Object (ICCV 2023)

NeRDi: Single-View NeRF Synthesis with Language-Guided Diffusion as General Image Priors

Consistent-1-to-3: Consistent Image to 3D View Synthesis via Geometry-aware Diffusion Models

Free3D: Consistent Novel View Synthesis without 3D Representation

GeoDream: Disentangling 2D and Geometric Priors for High-Fidelity and Consistent 3D Generation

iNVS: Repurposing Diffusion Inpainters for Novel View Synthesis


ABIDES: Agent-Based Interactive Discrete Event Simulation

Differentially Private Secure Multi-Party Computation for Federated Learning in Financial Applications

ABIDES: Towards High-Fidelity Market Simulation for AI Research

Get Real: Realism Metrics for Robust Limit Order Book Market Simulations

Flamingo: Multi-Round Single-Server Secure Aggregation with Applications to Private Federated Learning

Explaining Agent-Based Financial Market Simulation

Robust Risk-Sensitive Reinforcement Learning Agents for Trading Markets

Fluent: Round-efficient Secure Aggregation for Private Federated
  Learning


Real-Time 3D Semantic Reconstruction from 2D data

Kimera: an Open-Source Library for Real-Time Metric-Semantic Localization and Mapping

Evaluating the Impact of Semantic Segmentation and Pose Estimation on Dense Semantic SLAM

FM-Fusion: Instance-Aware Semantic Mapping Boosted by Vision-Language Foundation Models


Solvation model for the plane wave DFT code VASP.

High-Throughput Computational-Experimental Screening Protocol for the Discovery of Bimetallic Catalysts

Computational assessment of the efficacy of halides as shape-directing agents in nanoparticle growth

High-Performance of Electrocatalytic CO2 Reduction on Defective Graphene-Supported Cu4S2 Cluster