An Image is Worth One Word: Personalizing Text-to-Image Generation using
  Textual Inversion

Cones 2: Customizable Image Synthesis with Multiple Subjects

Zero-shot Generation of Coherent Storybook from Plain Text Story using
  Diffusion Models

Fill-Up: Balancing Long-Tailed Data with Generative Models

Concept Sliders: LoRA Adaptors for Precise Control in Diffusion Models

Is This Loss Informative? Faster Text-to-Image Customization by Tracking
  Objective Dynamics


PyTorch implementation of "FullSubNet: A Full-Band and Sub-Band Fusion Model for Real-Time Single-Channel Speech Enhancement."

Fullsubnet: A Full-Band and Sub-Band Fusion Model for Real-Time Single-Channel Speech Enhancement

Improving Speech Enhancement through Fine-Grained Speech Characteristics

Speech Dereverberation with a Reverberation Time Shortening Target

TAPLoss: A Temporal Acoustic Parameter Loss for Speech Enhancement

Fast FullSubNet: Accelerate Full-band and Sub-band Fusion Model for
  Single-channel Speech Enhancement

SceneFake: An Initial Dataset and Benchmarks for Scene Fake Audio
  Detection

GIST-AiTeR System for the Diarization Task of the 2022 VoxCeleb Speaker
  Recognition Challenge

Interpretations of Domain Adaptations via Layer Variational Analysis


Conformer-based Metric GAN for speech enhancement

CMGAN: Conformer-based Metric GAN for Speech Enhancement

CMGAN: Conformer-Based Metric-GAN for Monaural Speech Enhancement

LauraGPT: Listen, Attend, Understand, and Regenerate Audio with GPT


KnowledgeNet: A Benchmark Dataset for Knowledge Base Population

Matching the Blanks: Distributional Similarity for Relation Learning

Entity, Relation, and Event Extraction with Contextualized Span Representations

Survey on English Entity Linking on Wikidata

Enriching Relation Extraction with OpenIE


A Toolbox for MultiModal Recommendation. Integrating 10+ Models...

Bootstrap Latent Representations for Multi-modal Recommendation

A Comprehensive Survey on Multimodal Recommender Systems: Taxonomy,
  Evaluation, and Future Directions

MMRec: Simplifying Multimodal Recommendation

Large Multi-modal Encoders for Recommendation

Multimodal Recommender Systems: A Survey

Multi-View Graph Convolutional Network for Multimedia Recommendation

Proceedings of the 31st ACM International Conference on Multimedia

FMMRec: Fairness-aware Multimodal Recommendation


This  is a  Experimental version of OpenCL by AMD Research, we now recommend you to use The official BVLC Caffe OpenCL branch is over at Caffe branch now at https://github.com/BVLC/caffe/tree/opencl

Deep Learning on FPGAs: Past, Present, and Future

Boda-RTC: Productive Generation of Portable, Efficient Code for Convolutional Neural Networks on Mobile Computing Platforms

Compressed Learning of Deep Neural Networks for OpenCL-Capable Embedded Systems

Development of JavaScript-based deep learning platform and application to distributed training


DESI spectral visualization tools

The DESI Survey Validation: Results from Visual Inspection of Bright Galaxies, Luminous Red Galaxies, and Emission-line Galaxies

The DESI Survey Validation: Results from Visual Inspection of the Quasar Survey Spectra

DESI Observations of the Andromeda Galaxy: Revealing the Immigration History of Our Nearest Neighbor

Performance of the Quasar Spectral Templates for the Dark Energy Spectroscopic Instrument

Jupyter-Enabled Astrophysical Analysis Using Data-Proximate Computing Platforms


Standard tools and protocols for MiSeq amplicon sequencing of 16S rRNA genes

Nonalcoholic fatty liver disease is associated with dysbiosis independent of body mass index and insulin resistance

The Gut Microbiota of Healthy Aged Chinese Is Similar to That of the Healthy Young

Promising Prebiotic Candidate Established by Evaluation of Lactitol, Lactulose, Raffinose, and Oligofructose for Maintenance of a Lactobacillus-Dominated Vaginal Microbiota

New Primers for Discovering Fungal Diversity Using Nuclear Large Ribosomal DNA

Nutritional, Microbial, and Allergenic Changes during the Fermentation of Cashew ‘Cheese’ Product Using a Quinoa-Based Rejuvelac Starter Culture

The oral microbiome of patients with axial spondyloarthritis compared to healthy individuals

Preen gland microbiota covary with major histocompatibility complex genotype in a songbird

Data on the gut and saliva microbiota from a cohort of atherosclerosis patients determined by 16S rRNA gene sequencing

Multiple Fungi May Connect the Roots of an Orchid (Cypripedium reginae) and Ash (Fraxinus nigra) in Western Newfoundland


PSF Imagette Photometric Extraction - PSF photometry for CHEOPS data

The atmosphere and architecture of WASP-189 b probed by its CHEOPS phase curve

CHEOPS geometric albedo of the hot Jupiter HD 209458 b

TOI-5678b: A 48-day transiting Neptune-mass planet characterized with CHEOPS and HARPS

Two warm Neptunes transiting HIP 9618 revealed by TESS and Cheops

Monthly Notices of the Royal Astronomical Society

The HD 93963 A transiting system: A 1.04 d super-Earth and a 3.65 d sub-Neptune discovered by TESS and CHEOPS

55 Cancri e's occultation captured with CHEOPS

Refined parameters of the HD 22946 planetary system and the true orbital period of planet d

The geometric albedo of the hot Jupiter HD 189733b measured with CHEOPS

Phase curve and geometric albedo of WASP-43b measured with CHEOPS, TESS, and HST WFC3/UVIS

TESS and CHEOPS discover two warm sub-Neptunes transiting the bright K-dwarf HD 15906

Monthly notices of the Royal Astronomical Society


This is a modified version of the L-PICOLA code extending the COLA approach for simulating cosmological structure formation to theories that exhibit scale-dependent growth. It can compute matter power-spectra (CDM and total), redshift-space multipole power-spectra P0,P2,P4 and do halofinding on the fly. It can also include the effects of massive neutrinos on structure formation.

COLA with scale-dependent growth: applications to screened modified gravity models

Journal of Cosmology and Astroparticle Physics

COLA with massive neutrinos

Cosmological constraints on the gravitational constant

Assessing non-linear models for galaxy clustering III: theoretical accuracy for stage IV surveys

Journal of cosmology and astroparticle physics

Euclid: Modelling massive neutrinos in cosmology – a code comparison

Nonlinear cosmological structure with ultralight bosons via modified gravity

Sesame: A power spectrum emulator pipeline for beyond-ΛCDM
  models


DocBank: A Benchmark Dataset for Document Layout Analysis

LayoutLM: Pre-training of Text and Layout for Document Image Understanding

TableBank: Table Benchmark for Image-based Table Detection and Recognition

A Benchmark of PDF Information Extraction Tools Using a Multi-task and Multi-domain Evaluation Framework for Academic Documents


Real-time water body extent in drylands from Sentinel-1


Self-labelling via simultaneous clustering and representation learning. (ICLR 2020)

Measuring the Interpretability of Unsupervised Representations via
  Quantized Reverse Probing

A Survey on Self-Supervised Representation Learning


Holistic Evaluation of Language Models

True Few-Shot Learning with Prompts -- A Real-World Perspective

Efficiency Pentathlon: A Standardized Arena for Efficiency Evaluation


CSI: Novelty Detection via Contrastive Learning on Distributionally Shifted Instances (NeurIPS 2020)

OpenMatch: Open-Set Semi-supervised Learning with Open-set Consistency Regularization

OODformer: Out-Of-Distribution Detection Transformer

Evaluating Out-of-Distribution Detectors Through Adversarial Generation
  of Outliers

Out-of-Distribution Detection Without Class Labels


Data and code for Shen, Horikawa, Majima, and Kamitani (2019) Deep image reconstruction from human brain activity. PLoS Comput. Biol. http://dx.doi.org/10.1371/journal.pcbi.1006633.

Generating Images with Perceptual Similarity Metrics based on Deep Networks

Inter-individual deep image reconstruction via hierarchical neural code conversion

Reconstructing visual illusory experiences from human brain activity

Sound reconstruction from human brain activity via a generative model
  with brain-like auditory features


Python tools to recover precise rotation profiles of disks.

Spiral arms in the protoplanetary disc HD100453 detected with ALMA: evidence for binary–disc interaction and a vertical temperature gradient

Evidence for a Vertical Dependence on the Pressure Structure in AS 209

Spiral Structure in the Gas Disk of TW Hya

eddy: Extracting Protoplanetary Disk Dynamics with Python

Mapping the 3D Kinematical Structure of the Gas Disk of HD 169142

Observability of the vertical shear instability in protoplanetary disk CO kinematics

A kinematic excess in the annular gap and gas depleted cavity in the
  disc around HD 169142

Observational Signatures of Circumbinary Discs I: Kinematics

Kinematic Structures in Planet-Forming Disks


Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile

MEDALT: single-cell copy number lineage tracing enabling gene discovery

Single-cell copy number lineage tracing enabling gene discovery


A collection of commonly used datasets as benchmarks for density estimation in MaLe

Turbocharging Treewidth-Bounded Bayesian Network Structure Learning


A continual model for human activity recognition (called HAR-GAN). It is based on a technique called `generative replay` which two models (classifier and generator) are trainined in the same time to keep learning a new task but also retrain previously learned knwoledge.

GANs Trained by a Two Time-Scale Update Rule Converge to a Local Nash Equilibrium

Improved Techniques for Training GANs

Unrolled Generative Adversarial Networks


Image-Process based Atmospheric River Tracking (IPART) algorithms

A Comparison of Northern Hemisphere Atmospheric Rivers Detected by a New Image-Processing Based Method and Magnitude-Thresholding Based Methods

Atmospheric rivers and associated extreme rainfall over Morocco


fast library for ANN search and KNN graph construction

Fast Approximate Nearest Neighbor Search With The Navigating Spreading-out Graph

EFANNA : An Extremely Fast Approximate Nearest Neighbor Search Algorithm Based on kNN Graph

A Revisit of Hashing Algorithms for Approximate Nearest Neighbor Search

Fast Approximate Nearest Neighbor Search With Navigating Spreading-out Graphs

FreshDiskANN: A Fast and Accurate Graph-Based ANN Index for Streaming Similarity Search.

A Revisit on Deep Hashings for Large-scale Content Based Image Retrieval

Fast Approximate Nearest Neighbor Search with a Dynamic Exploration
  Graph using Continuous Refinement

A Survey on Efficient Processing of Similarity Queries over Neural Embeddings


This repository is dedicated to the fit@TDS software. A python code aiming at the retrieving of material parameter from a TeraHertz time domain spectroscopy (TDS) measurements from a fit in the time domain.

THz-TDS Time-Trace Analysis for the Extraction of Material and Metamaterial Parameters

Broadband Super-Resolution Terahertz Time-Domain Spectroscopy Applied to Gas Analysis


A database of marine reference data like climatologies and bathymetry


Testing the Ability of Language Models to Interpret Figurative Language

Large Language Model Displays Emergent Ability to Interpret Novel
  Literary Metaphors


A curated list of research papers and resources on code-switching

Do Multilingual Users Prefer Chat-bots that Code-mix? Let's Nudge and Find Out!

Proceedings of the ACM on human-computer interaction

The Decades Progress on Code-Switching Research in NLP: A Systematic Survey on Trends and Challenges

Code-Switching Language Modeling with Bilingual Word Embeddings: A Case Study for Egyptian Arabic-English

Towards Translating Mixed-Code Comments from Social Media


Find and characterise transposable element insertions

L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis

Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme

The Role of SINE-VNTR-Alu (SVA) Retrotransposons in Shaping the Human Genome

International journal of molecular sciences

Dynamic Methylation of an L1 Transduction Family during Reprogramming and Neurodifferentiation

Non-coding genetic variation shaping mental health


The CosmoSIS parameter estimation library.

Hyper Suprime-Cam Year 3 results: Cosmology from cosmic shear two-point correlation functions

Constraining the baryonic feedback with cosmic shear using the DES Year-3 small-scale measurements

Cluster cosmology with anisotropic boosts: Validation of a novel forward
  modeling analysis and application on SDSS redMaPPer clusters


RISC-V Supervisor Binary Interface (RISC-V SBI) implementation in Rust; runs on M-mode; good support for embedded Rust ecosystem


Planck 2018 results. VIII. Gravitational lensing

Maximum a posteriori CMB lensing reconstruction

Planck intermediate results. LIII. Detection of velocity dispersion from the kinetic Sunyaev-Zeldovich effect

Quadratic estimators for CMB weak lensing

Internal Delensing of Cosmic Microwave Background Polarization B-Modes with the POLARBEAR Experiment.

Optimal filtering for CMB lensing reconstruction

Impact of thermal Sunyaev–Zeldovich effect on cross-correlations between Planck cosmic microwave background lensing and SDSS galaxy density fields


Neural Surface reconstruction based on Instant-NGP. Efficient and customizable boilerplate for your research projects. Train NeuS in 10min!

Wonder3D: Single Image to 3D using Cross-Domain Diffusion

OpenIllumination: A Multi-Illumination Dataset for Inverse Rendering
  Evaluation on Real Objects

MVDiffusion++: A Dense High-resolution Multi-view Diffusion Model for Single or Sparse-view 3D Object Reconstruction

NeuManifold: Neural Watertight Manifold Reconstruction with Efficient
  and High-Quality Rendering Support

EpiDiff: Enhancing Multi-View Synthesis via Localized Epipolar-Constrained Diffusion

GigaPose: Fast and Robust Novel Object Pose Estimation via One
  Correspondence


C++/CUDA GPU pulsar searching library

The SUrvey for Pulsars and Extragalactic Radio Bursts - I. Survey description and overview

Pulsar–black hole binaries: prospects for new gravity tests with future radio telescopes

THE GMRT HIGH RESOLUTION SOUTHERN SKY SURVEY FOR PULSARS AND TRANSIENTS. I. SURVEY DESCRIPTION AND INITIAL DISCOVERIES

The High Time Resolution Universe survey - XIV. Discovery of 23 pulsars through GPU-accelerated reprocessing

IQRM: real-time adaptive RFI masking for radio transient and pulsar searches

A Framework for Assessing the Performance of Pulsar Search Pipelines

Discovery of ASKAP J173608.2-321635 as a Highly-Polarized Transient
  Point Source with the Australian SKA Pathfinder

A PRESTO-based parallel pulsar search pipeline used for FAST drift scan data

Research in Astronomy and Astrophysics/Research in astronomy and astrophysics

The High Time Resolution Universe Pulsar Survey – XVII. PSR J1325−6253, a low eccentricity double neutron star system from an ultra-stripped supernova

The MPIfR-MeerKAT Galactic Plane survey I -- System setup and early
  results


Dirichlet Process based methods for subclonal reconstruction of tumours

Spatial genomics maps the structure, nature and evolution of cancer clones

Prostate cancer evolution from multilineage primary to single lineage metastases with implications for liquid biopsy

Lineage-defined leiomyosarcoma subtypes emerge years before diagnosis and determine patient survival

In utero origin of myelofibrosis presenting in adult monozygotic twins

Multi-site clonality analysis uncovers pervasive heterogeneity across melanoma metastases

Multi-site clonality analyses uncovers pervasive subclonal heterogeneity and branching evolution across melanoma metastases

Waldenström macroglobulinemia whole genome reveals prolonged germinal center activity and late copy number aberrations


Predict mutated T-cell epitopes from sequencing data

Genomic Features of Response to Combination Immunotherapy in Patients with Advanced Non-Small-Cell Lung Cancer

Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis

Intratumoral heterogeneity and clonal evolution in liver cancer

Somatic Mutations and Neoepitope Homology in Melanomas Treated with CTLA-4 Blockade

Landscape of oncoviral genotype and co-infection via Human papilloma and Hepatitis B viral tumor in-situ profiling

Discovering tumor-reactive T-cell receptors through single-cell sequencing of tumor-infiltrating lymphocytes


Synteny and Rearrangement Identifier

Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies

Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa

Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet

Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons

Proceedings of the National Academy of Sciences of the United States of America

A beginner’s guide to assembling a draft genome and analyzing structural variants with long-read sequencing technologies

A gap-free reference genome reveals structural variations associated with flowering time in rapeseed (Brassica napus)

Chromosome-Level Genome Assembly and Population Genomic Analyses Reveal Geographic Variation and Population Genetic Structure of Prunus tenella


Paxos protocol framework

Bottlenecks in Blockchain Consensus Protocols

WPaxos: Wide Area Network Flexible Consensus

BigBFT: A Multileader Byzantine Fault Tolerance Protocol for High Throughput

BunchBFT: Across-Cluster Consensus Protocol


Creative Commons Attribution Share Alike 4.0 International

Korean NLU Benchmark

KLUE: Korean Language Understanding Evaluation

K-EPIC: Entity-Perceived Context Representation in Korean Relation Extraction

A Survey on Awesome Korean NLP Datasets


Deep learning with dynamic computation graphs in TensorFlow

Improved Semantic Representations From Tree-Structured Long Short-Term Memory Networks

Refining Word Embeddings for Sentiment Analysis

Empirical Methods in Natural Language Processing

Deep Learning with Dynamic Computation Graphs

Dynamic Control Flow in Large-Scale Machine Learning

AMPNet: Asynchronous Model-Parallel Training for Dynamic Neural Networks

Learning Deep Nearest Neighbor Representations Using Differentiable Boundary Trees

Linguistically Rich Vector Representations of Supertags for TAG Parsing

Cavs: A Vertex-centric Programming Interface for Dynamic Neural Networks


Analysis and tutorial materials associated with the NANOGrav Collaboration's search for an isotropic stochastic gravitational-wave background in 12.5-years of precision millisecond pulsar timing data.

Primordial gravitational waves from NANOGrav: A broken power-law approach

Non-tensorial gravitational wave background in NANOGrav 12.5-year data set

中国科学. 物理学 力学 天文学

Updated constraints on amplitude and tilt of the tensor primordial spectrum

Bayesian Implications for the Primordial Black Holes from NANOGrav's Pulsar-Timing Data Using the Scalar-Induced Gravitational Waves


Detecting Regulatory Elements using GRO-seq and PRO-seq

Identification of active transcriptional regulatory elements from GRO-seq data

Identification of regulatory elements from nascent transcription using dREG

A-MYB and BRDT-dependent RNA Polymerase II pause release orchestrates transcriptional regulation in mammalian meiosis

Quantifying RNA synthesis at rate-limiting steps of transcription using nascent RNA-sequencing data

A bi-stable feedback loop between GDNF, EGR1, and ERα contribute to endocrine resistant breast cancer


A package for tree-based statistical estimation and inference using optimal decision trees.

Strong Optimal Classification Trees

Learning Optimal Prescriptive Trees from Observational Data

Learning Optimal Fair Decision Trees: Trade-offs Between Interpretability, Fairness, and Accuracy

ODTlearn: A Package for Learning Optimal Decision Trees for Prediction
  and Prescription


A sparse polynomial optimization tool based on the moment-SOS hierarchy.

Chordal-TSSOS: A Moment-SOS Hierarchy That Exploits Term Sparsity with Chordal Extension

CS-TSSOS: Correlative and Term Sparsity for Large-Scale Polynomial Optimization

Sparse Polynomial Optimization: Theory and Practice

TSSOS: a Julia library to exploit sparsity for large-scale polynomial optimization

Certifying global optimality of AC-OPF solutions via sparse polynomial optimization

Exploiting Sparsity in Complex Polynomial Optimization

Benchmarking Large-Scale ACOPF Solutions and Optimality Bounds

Fairness in Forecasting of Observations of Linear Dynamical Systems

A Correlatively Sparse Lagrange Multiplier Expression Relaxation for Polynomial Optimization

A more efficient reformulation of complex SDP as real SDP


The who, what, and where of Voytek Lab code.

Parameterizing neural power spectra into periodic and aperiodic components

Cycle-by-cycle analysis of neural oscillations

Methodological considerations for studying neural oscillations

Electrophysiological Frequency Band Ratio Measures Conflate Periodic and Aperiodic Neural Activity


Polyglot Live Programming with GraalVM, the Language Server Protocol (LSP), and VS Code.

Exploratory and Live, Programming and Coding: A Literature Study Comparing Perspectives on Liveness

Babylonian-style Programming: Design and Implementation of an Integration of Live Examples into General-purpose Source Code

Example-based live programming for everyone: building language-agnostic tools for live programming with LSP and GraalVM

SIGPLAN symposium on New ideas, new paradigms, and reflections on programming and software

GraalSqueak: toward a smalltalk-based tooling platform for polyglot programming

Proceedings of the 16th ACM SIGPLAN International Conference on Managed Programming Languages and Runtimes

Implementing Babylonian/S by Putting Examples Into Contexts: Tracing Instrumentation for Example-based Live Programming as a Use Case for Context-oriented Programming

Proceedings of the Workshop on Context-oriented Programming  - COP '19


Create and processing emissions for numeric air quality models

Emissions Database for Global Atmospheric Research


Model Photovoltaic Fault Detector based in model detector YOLOv.3, this repository contains four detector model with their weights and the explanation of how to use these models.

SSD: Single Shot MultiBox Detector

YOLOv3: An Incremental Improvement


Algorithms for abstention, calibration and domain adaptation to label shift.

Leveraging Unlabeled Data to Predict Out-of-Distribution Performance

Maximum Likelihood with Bias-Corrected Calibration is Hard-To-Beat at Label Shift Adaptation

A General Framework for Abstention Under Label Shift


A Python package for generating concise, high-quality summaries of a probability distribution

Super-Samples from Kernel Herding

Positively Weighted Kernel Quadrature via Subsampling

Generalized Kernel Thinning

Distribution Compression in Near-linear Time

Kernel quadrature with randomly pivoted Cholesky

Compress Then Test: Powerful Kernel Testing in Near-linear Time


An open source Python server to deploy energy management solutions for buildings


OpenStaticAnalyzer is a source code analyzer tool, which can perform deep static analysis of the source code of complex systems.

An Automatically Created Novel Bug Dataset and its Validation in Bug Prediction

A public unified bug dataset for java and its assessment regarding metrics and bug prediction

A longitudinal study of static analysis warning evolution and the effects of PMD on software quality in Apache open source projects

The SmartSHARK Ecosystem for Software Repository Mining

Building the MSR Tool Kaiaulu: Design Principles and Experiences


Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.

DeepIso: A Deep Learning Model for Peptide Feature Detection from LC-MS map

Dinosaur: A Refined Open-Source Peptide MS Feature Detector


Estimate metagenomic coverage and sequence diversity

Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets

Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity

Estimating coverage in metagenomic data sets and why it matters


Distributed NMF/NTF Library

Deep data analysis via physically constrained linear unmixing: universal framework, domain examples, and a community-wide platform

Advanced structural and chemical imaging

MPI-FAUN: An MPI-Based Framework for Alternating-Updating Nonnegative Matrix Factorization

Fast and Secure Distributed Nonnegative Matrix Factorization

IEEE transactions on knowledge and data engineering

PLANC: Parallel Low Rank Approximation with Non-negativity Constraints

PL-NMF: Parallel Locality-Optimized Non-negative Matrix Factorization


ReGAN: Sequence GAN using RE[INFORCE|LAX|BAR] based PG estimators

SeqGAN: Sequence Generative Adversarial Nets with Policy Gradient

Backpropagation through the Void: Optimizing control variates for black-box gradient estimation

REBAR: Low-variance, unbiased gradient estimates for discrete latent variable models

ReGAN: RE[LAX|BAR|INFORCE] based Sequence Generation using GANs


Library for computing with multidimensional functions

High-dimensional stochastic optimal control using continuous tensor decompositions

The international journal of robotics research

Gradient-based optimization for regression in the functional tensor-train format

Functional Tensor-Train Chebyshev Method for Multidimensional Quantum Dynamics Simulations.

Approximation in the extended functional tensor train format


MAFAND-MT

A Few Thousand Translations Go a Long Way! Leveraging Pre-trained Models for African News Translation

AfriTeVA: Extending ?Small Data? Pretraining Approaches to Sequence-to-Sequence Models

Workshop on Deep Learning Approaches for Low-Resource Natural Language Processing


Faster Recurrent Neural Network Language Modeling Toolkit with Noise Contrastive Estimation and Hierarchical Softmax

Acoustic and Textual Data Augmentation for Improved ASR of Code-Switching Speech

Chat Detection in an Intelligent Assistant: Combining Task-oriented and Non-task-oriented Spoken Dialogue Systems

End-to-End Code-Switching ASR for Low-Resourced Language Pairs

Learning from past mistakes: improving automatic speech recognition output via noisy-clean phrase context modeling

APSIPA transactions on signal and information processing

Semi-supervised acoustic model training for speech with code-switching

Interactive Abstractive Summarization for Event News Tweets

Language Models Explain Word Reading Times Better Than Empirical Predictability

Design and Structure of The Juman++ Morphological Analyzer Toolkit

Multi-Graph Decoding for Code-Switching ASR

Chinese Preposition Selection for Grammatical Error Diagnosis

International Conference on Computational Linguistics


Libraries to analyze numerical simulations (python3)

The CAMELS Project: Cosmology and Astrophysics with Machine-learning Simulations

Nearest neighbour distributions: New statistical measures for cosmological clustering

Monthly notices of the Royal Astronomical Society

A Lagrangian perturbation theory in the presence of massive neutrinos

Journal of Cosmology and Astroparticle Physics

Cosmological cross-correlations and nearest neighbour distributions

Learning Cosmology and Clustering with Cosmic Graphs

Neural Networks as Optimal Estimators to Marginalize Over Baryonic Effects

Field-level Neural Network Emulator for Cosmological N-body Simulations

CARPool Covariance: Fast, unbiased covariance estimation for large-scale structure observables

Quijote-PNG: Simulations of Primordial Non-Gaussianity and the Information Content of the Matter Field Power Spectrum and Bispectrum

Quijote-PNG: The Information Content of the Halo Power Spectrum and Bispectrum


EAZY photometric redshift code (Brammer, van Dokkum & Coppi 2008)

Galaxy growth in a massive halo in the first billion years of cosmic history

Near infrared spectroscopy and star-formation histories of 3 <= z <= 4 quiescent galaxies

Starbursts in and out of the star-formation main sequence

A High-Resolution Hubble Space Telescope Study of Lyman Continuum Leakers at z∼3

HFF-DeepSpace Photometric Catalogs of the Twelve Hubble Frontier Fields,
  Clusters and Parallels: Photometry, Photometric Redshifts, and Stellar Masses

The Astrophysical journal. Supplement series/Astrophysical journal. Supplement series

A Census of the Bright z = 8.5–11 Universe with the Hubble and Spitzer Space Telescopes in the CANDELS Fields

Evaluation of probabilistic photometric redshift estimation approaches for The Rubin Observatory Legacy Survey of Space and Time (LSST)

Monthly Notices of the Royal Astronomical Society

The MUSE Hubble Ultra Deep Field Survey: IV. Global properties of C III]
  emitters

Extending the evolution of the stellar mass-size relation at z <= 2 to low stellar mass galaxies from HFF and CANDELS

Confirmation and refutation of very luminous galaxies in the early Universe


A neural word aligner based on multilingual BERT

Word Alignment by Fine-tuning Embeddings on Parallel Corpora

Frustratingly Easy Label Projection for Cross-lingual Transfer

Improving Translation Faithfulness of Large Language Models via
  Augmenting Instructions

Constructing Code-mixed Universal Dependency Forest for Unbiased Cross-lingual Relation Extraction

Cross-Align: Modeling Deep Cross-lingual Interactions for Word Alignment

Learning Contextualised Cross-lingual Word Embeddings and Alignments for Extremely Low-Resource Languages Using Parallel Corpora

EVALIGN: Visual Evaluation of Translation Alignment Models

Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics: System Demonstrations

LibriS2S: A German-English Speech-to-Speech Translation Corpus

Deliberate then Generate: Enhanced Prompting Framework for Text
  Generation

Adapting Offline Speech Translation Models for Streaming with Future-Aware Distillation and Inference


Crowd Sourced Emotional Multimodal Actors Dataset (CREMA-D)

x-vectors meet emotions: A study on dependencies between emotion and speaker recognition

CopyPaste: An Augmentation Method for Speech Emotion Recognition

Multi-Modal Residual Perceptron Network for Audio–Video Emotion Recognition


Psycholinguistic experiments online

Implicit Gender Bias in Linguistic Descriptions for Expected Events: The Cases of the 2016 United States and 2017 United Kingdom Elections

TED-Q: TED Talks and the Questions they Evoke

PROCEEDINGS OF THE 12TH INTERNATIONAL CONFERENCE ON LANGUAGE RESOURCES AND EVALUATION (LREC 2020)

Understanding the Effects of Constraint and Predictability in ERP

Neurobiology of language (Cambridge, Mass.)

Demonstratives as bundlers of conceptual structure

Glossa: a journal of general linguistics

Expressing Ignorance in Japanese: Contrastive wa versus sukunakutomo

A Knowledge Graph Based Approach to Social Science Surveys

A-maze of Natural Stories: Comprehension and surprisal in the Maze task

Comparing Humans and Models on a Similar Scale: Towards Cognitive Gender
  Bias Evaluation in Coreference Resolution

Scalar Inferences in the Acquisition of Even

Toward an accommodation account of deaccenting under nonidentity


Fast, integrative fine mapping with functional data

Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity

ABO O blood group as a risk factor for platelet reactivity in heparin-induced thrombocytopenia

3D genome organization links non-coding disease-associated variants to genes

Frontiers in cell and developmental biology

Diverse ancestry whole-genome sequencing association study identifies TBX5 and PTK7 as susceptibility genes for posterior urethral valves

Multi-ancestry genetic analysis of gene regulation in coronary arteries prioritizes disease risk loci

A genome-wide association study of bronchodilator response in participants of European and African ancestry from six independent cohorts


This is a code repository to efficiently train a deconvolutional neural network with rectified linear units.

Do Deep Neural Networks Learn Facial Action Units When Doing Expression Recognition?

How Deep Neural Networks Can Improve Emotion Recognition on Video Data

Super-Resolution via Deep Learning

Self-Tuned Deep Super Resolution

An Analysis of Unsupervised Pre-training in Light of Recent Advances

Decomposition-Based Domain Adaptation for Real-World Font Recognition


RADseq workflow built around STACKS

Predicting the genetic impact of stocking in Brook Charr (Salvelinus fontinalis) by combining RAD sequencing and modeling of explanatory variables.

Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon

Genetic and morphological support for possible sympatric origin of fish from subterranean habitats

Impact of supplementation on deleterious mutation distribution in an exploited salmonid

Supplementation stocking of Lake Trout (Salvelinus namaycush) in small boreal lakes: Ecotypes influence on growth and condition

Medaka Population Genome Structure and Demographic History Described via Genotyping-by-Sequencing

Design and validation of a 63K genome-wide SNP-genotyping platform for caribou/reindeer (Rangifer tarandus)

Evolution of an Amazonian Fish Is Driven by Allopatric Divergence Rather Than Ecological Divergence


MeetEval - A meeting transcription evaluation toolkit

On Word Error Rate Definitions and their Efficient Computation for
  Multi-Speaker Speech Recognition Systems

MeetEval: A Toolkit for Computation of Word Error Rates for Meeting Transcription Systems

SURT 2.0: Advances in Transducer-based Multi-talker Speech Recognition

Meeting Recognition with Continuous Speech Separation and
  Transcription-Supported Diarization


Python 3 library for processing historical English

From the Paft to the Fiiture: a Fully Automatic NMT and Word Embeddings Method for OCR Post-Correction

Recent Advances in Natural Language Processing

Revisiting NMT for Normalization of Early English Letters

North American Chapter of the Association for Computational Linguistics

Empirical Error Modeling Improves Robustness of Noisy Neural Sequence Labeling


PyTorch Re-Implementation of "Generating Sentences from a Continuous Space" by Bowman et al 2015 https://arxiv.org/abs/1511.06349

Unsupervised Paraphrasing by Simulated Annealing

A Stable Variational Autoencoder for Text Modelling

Improving Variational Autoencoder for Text Modelling with Timestep-Wise Regularisation

Text Morphing

Russian Natural Language Generation: Creation of a Language Modelling Dataset and Evaluation with Modern Neural Architectures


Text-to-Image generation. The repo for NeurIPS 2021 paper "CogView: Mastering Text-to-Image Generation via Transformers".

ARTIST: A Transformer-based Chinese Text-to-Image Synthesizer Digesting Linguistic and World Knowledge

Findings of the Association for Computational Linguistics: EMNLP 2022


Creative Commons Attribution 4.0 International

Systematic dataset of US sub-national Covid-19 policy data

Pandemic Policymaking in Presidential Federations: Explaining Subnational Responses to Covid-19 in Brazil, Mexico, and the United States

Direct and indirect mortality impacts of the COVID-19 pandemic in the United States, March 1, 2020 to January 1, 2022

Direct and indirect mortality impacts of the COVID-19 pandemic in the US, March 2020-April 2021

medRxiv : the preprint server for health sciences

The Impact of School Opening Model on SARS-CoV-2 Community Incidence and Mortality: A Nationwide Cohort Study

A Case Study of Family Violence During COVID-19 in San Antonio


BWT-based index for graphs

Computational pan-genomics: status, promises and challenges

Indexing Graphs for Path Queries with Applications in Genome Research

IEEE/ACM transactions on computational biology and bioinformatics

Indexing Variation Graphs

Workshop on Algorithm Engineering and Experimentation

Haplotype-aware graph indexes

Genome Informatics 2016


Dfam Transposable Element Tools Docker container.

RepeatModeler2: automated genomic discovery of transposable element families

Giant lungfish genome elucidates the conquest of land by vertebrates

Genetic Diversity in Invasive Populations of Argentine Stem Weevil Associated with Adaptation to Biocontrol

Genome assembly of the Australian black tiger shrimp (Penaeus monodon) reveals a novel fragmented IHHNV EVE sequence

The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes

Obligate sexual reproduction of a homothallic fungus closely related to the Cryptococcus pathogenic species complex

Activation of DNA Transposons and Evolution of piRNA Genes Through Interspecific Hybridization in Xenopus Frogs

Cost-effective long-read assembly of a hybrid Formica aquilonia × Formica polyctena wood ant genome from a single haploid individual

The genome sequence of Hirschfeldia incana, a new Brassicaceae model to improve photosynthetic light-use efficiency.

The Plant journal : for cell and molecular biology

Genome assembly and isoform analysis of a highly heterozygous New Zealand fisheries species, the tarakihi (Nemadactylus macropterus)


Official implementation of the paper "IteraTeR: Understanding Iterative Revision from Human-Written Text" (ACL 2022)

Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)

Read, Revise, Repeat: A System Demonstration for Human-in-the-loop Iterative Text Revision

Proceedings of the First Workshop on Intelligent and Interactive Writing Assistants (In2Writing 2022)

Improving Iterative Text Revision by Learning Where to Edit from Other Revision Tasks

Text revision in Scientific Writing Assistance: An Overview


SincNet is a neural architecture for efficiently processing raw audio samples.

LEAF: A Learnable Frontend for Audio Classification

Interpretable Convolutional Filters with SincNet

Universal Adversarial Perturbations Generative Network For Speaker Recognition

Detecting Spoofing Attacks Using VGG and SincNet: BUT-Omilia Submission to ASVspoof 2019 Challenge

Study of Pre-Processing Defenses Against Adversarial Attacks on State-of-the-Art Speaker Recognition Systems

Speech and Speaker Recognition from Raw Waveform with SincNet

Tune-In: Training Under Negative Environments with Interference for Attention Networks Simulating Cocktail Party Effect

On the Exploitability of Audio Machine Learning Pipelines to Surreptitious Adversarial Examples

Robust Raw Waveform Speech Recognition Using Relevance Weighted Representations


A python package for calculating the PESQ.

UnivNet: A Neural Vocoder with Multi-Resolution Spectrogram Discriminators for High-Fidelity Waveform Generation

Unsupervised Speech Enhancement Using Dynamical Variational Autoencoders

Real-time Monaural Speech Enhancement With Short-time Discrete Cosine Transform.

StoRIR: Stochastic Room Impulse Response Generation for Audio Data Augmentation

Rethinking the visual cues in audio-visual speaker extraction

FastMVAE: A Fast Optimization Algorithm for the Multichannel Variational Autoencoder Method

FastMVAE2: On Improving and Accelerating the Fast Variational Autoencoder-Based Source Separation Algorithm for Determined Mixtures

FRA-RIR: Fast Random Approximation of the Image-source Method


A repository with several curated datasets of counter-narratives to fight online hate speech.

CONAN - COunter NArratives through Nichesourcing: a Multilingual Dataset of Responses to Fight Online Hate Speech

Meeting of the Association for Computational Linguistics

Human-in-the-Loop for Data Collection: a Multi-Target Counter Narrative Dataset to Fight Online Hate Speech

Towards Knowledge-Grounded Counter Narrative Generation for Hate Speech

Human-Machine Collaboration Approaches to Build a Dialogue Dataset for Hate Speech Countering


S-RL Toolbox: Reinforcement Learning (RL) and State Representation Learning (SRL) for Robotics

Decoupling feature extraction from policy learning: assessing benefits of state representation learning in goal based robotics

S-RL Toolbox: Environments, Datasets and Evaluation Metrics for State Representation Learning

DREAM Architecture: a Developmental Approach to Open-Ended Learning in Robotics


Iterated integral signature calculations

In vitro germination of Agathosma betulina, an economically important species of Southern Africa

A Data-driven Market Simulator for Small Data Environments

Sig-SDEs model for quantitative finance

Nonparametric pricing and hedging of exotic derivatives

Numerical method for model-free pricing of exotic derivatives using rough path signatures

Calculation of Iterated-Integral Signatures and Log Signatures


An easy to use tool for cryptanalysis of symmetric primitives based on SMT/SAT solvers.

Improved Rectangle Attacks on SKINNY and CRAFT

IACR transaction on symmetric cryptology

A bit-vector differential model for the modular addition by a constant and its applications to differential and impossible-differential cryptanalysis

CDCL(Crypto) SAT Solvers for Cryptanalysis

Characteristic automated search of cryptographic algorithms for distinguishing attacks (CASCADA)


Implementation of protocols in Falcon

Falcon: Honest-Majority Maliciously Secure Framework for Private Deep Learning

CryptGPU: Fast Privacy-Preserving Machine Learning on the GPU

Efficient Privacy-Preserving K-Means Clustering from Secret-Sharing-Based Secure Three-Party Computation

Bicoptor: Two-round Secure Three-party Non-linear Computation without
  Preprocessing for Privacy-preserving Machine Learning


This repo is the home of Romanian Transformers.

The birth of Romanian BERT

RoBERT – A Romanian BERT Model

International Conference on Computational Linguistics

Exploring the Power of Romanian BERT for Dialect Identification

Workshop on NLP for Similar Languages, Varieties and Dialects

Applying Multilingual and Monolingual Transformer-Based Models for Dialect Identification

Deception detection in text and its relation to the cultural dimension of individualism/collectivism


E3: Encrypt-Everything-Everywhere framework for compiling C++ programs with encrypted operands.

Survey on Fully Homomorphic Encryption, Theory, and Applications

CoFHEE: A Co-processor for Fully Homomorphic Encryption Execution

Accelerating Fully Homomorphic Encryption by Bridging Modular and Bit-Level Arithmetic


Expressive Body Capture: 3D Hands, Face, and Body from a Single Image

Can Action be Imitated? Learn to Reconstruct and Transfer Human Dynamics from Videos

PROCEEDINGS OF THE 2021 INTERNATIONAL CONFERENCE ON MULTIMEDIA RETRIEVAL (ICMR '21)


An open-source computer program for the analysis of wave diffraction and radiation of three-dimensional floating or submerged structures


Fast Whole-Genome Similarity (ANI) Estimation

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters

Gemmatimonas groenlandica sp. nov. Is an Aerobic Anoxygenic Phototroph in the Phylum Gemmatimonadetes

Unravelling the diversity of magnetotactic bacteria through analysis of open genomic databases

Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis

Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria

Prevalence and Distribution Characteristics of blaKPC-2 and blaNDM-1 Genes in Klebsiella pneumoniae

Molecular Epidemiology and Clone Transmission of Carbapenem-Resistant Acinetobacter baumannii in ICU Rooms

Legionella Diversity and Spatiotemporal Variation in the Occurrence of Opportunistic Pathogens within a Large Building Water System

Functional and phylogenetic analyses of camel rumen microbiota associated with different lignocellulosic substrates


SummEval: Re-evaluating Summarization Evaluation

Fill in the BLANC: Human-free quality estimation of document summaries

Play the Shannon Game With Language Models: A Human-Free Approach to Summary Evaluation

Is human scoring the best criteria for summary evaluation?

Sensitivity of BLANC to human-scored qualities of text summaries

ESTIME: Estimation of Summary-to-Text Inconsistency by Mismatched Embeddings

Neural Embeddings for Text

OpinSummEval: Revisiting Automated Evaluation for Opinion Summarization

Does Summary Evaluation Survive Translation to Other Languages?

Towards Human-Free Automatic Quality Evaluation of German Summarization


Code Release for MViTv2 on Image Recognition.

Multiscale Vision Transformers

MViTv2: Improved Multiscale Vision Transformers for Classification and Detection

Reversible Vision Transformers

Bringing Image Scene Structure to Video via Frame-Clip Consistency of Object Tokens

PromptonomyViT: Multi-Task Prompt Learning Improves Video Transformers
  using Synthetic Scene Data


Tracarbon tracks your device's energy consumption and calculates your carbon emissions using your location.

eco2AI: Carbon Emissions Tracking of Machine Learning Models as the First Step Towards Sustainable AI

Efficiency is Not Enough: A Critical Perspective of Environmentally
  Sustainable AI

Watt For What: Rethinking Deep Learning's Energy-Performance
  Relationship


Privacy-Preserving Ads

Deep Learning with Label Differential Privacy

Masked LARk: Masked Learning, Aggregation and Reporting worKflow

Lessons from the AdKDD'21 Privacy-Preserving ML Challenge


Repository for SEN12MS related codes and utilities

Remote Sensing Image Classification with the SEN12MS Dataset

Explaining the Effects of Clouds on Remote Sensing Scene Classification

IEEE journal of selected topics in applied earth observations and remote sensing

There Are No Data Like More Data: Datasets for deep learning in Earth observation

IEEE geoscience and remote sensing magazine

Model Generalization in Deep Learning Applications for Land Cover Mapping


Metapackage for brightway2 imports and documentation


Modules for processing extracellular electrophysiology data from Neuropixels probes

SpikeInterface, a unified framework for spike sorting

A midbrain-thalamus-cortex circuit reorganizes cortical dynamics to initiate movement

Reconciling functional differences in populations of neurons recorded with two-photon imaging and electrophysiology

High-density electrode recordings reveal strong and specific connections between retinal ganglion cells and midbrain neurons

Influence of claustrum on cortex varies by area, layer, and cell type

Distributed coding of duration in rodent prefrontal cortex during time reproduction

Differential ripple propagation along the hippocampal longitudinal axis

WaveMAP for identifying putative cell types from in vivo electrophysiology


UDPipe: Trainable pipeline for tokenizing, tagging, lemmatizing and parsing Universal Treebanks and other CoNLL-U files

Twitter Universal Dependency Parsing for African-American and Mainstream American English

PROCEEDINGS OF THE 56TH ANNUAL MEETING OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS (ACL), VOL 1

Empirical Linguistic Study of Sentence Embeddings

Part of Speech Tagging: Shallow or Deep Learning?

Northern European journal of language technology

One format to rule them all – The emtsv pipeline for Hungarian

Slavic Forest, Norwegian Wood

Universal Dependencies for Manx Gaelic

Cross-Lingual Adaptation Using Universal Dependencies

Comparison of Current Approaches to Lemmatization: A Case Study in Estonian

Nordic Conference of Computational Linguistics

Slavic Forest, Norwegian Wood (scripts)


CFD-DEM Solver with emphasis on sediment transport

CFD–DEM simulations of current-induced dune formation and morphological evolution

Investigating the settling dynamics of cohesive silt particles with particle-resolving simulations

Study of sedimentation of non-cohesive particles via CFD–DEM simulations

Realistic representation of grain shapes in CFD-DEM simulations of sediment transport with a bonded-sphere approach

Coupled CFD‐DEM modeling to predict how EPS affects bacterial biofilm deformation, recovery and detachment under flow conditions

Sediment micromechanics in sheet flows induced by asymmetric waves: A CFD-DEM study

Particle dynamics in self-generated dunes over a range of hydraulic and sediment transport conditions using LES--DEM

Numerical Investigating on Representativeness of Tracers in PIV Model Test of Dredged Slurry Treated by Vacuum Preloading

CAMDLES: CFD-DEM Simulation of Microbial Communities in Spaceflight and Artificial Microgravity


Deep Clustering for Unsupervised Learning of Visual Features

Understanding Neural Networks Through Deep Visualization

Unsupervised Pre-Training of Image Features on Non-Curated Data

Self-Supervised Relational Reasoning for Representation Learning

Learning as the unsupervised alignment of conceptual systems

Improving out-of-distribution generalization via multi-task self-supervised pretraining

A Survey on Self-Supervised Representation Learning


Protégé plugin for creating OWL ontologies from spreadsheets

Ontology-based decision tree model for prediction in a manufacturing network

A Comprehensive Fuzzy Ontology-Based Decision Support System for Alzheimer’s Disease Diagnosis

The African wildlife ontology tutorial ontologies

An Indoor Navigation Methodology for Mobile Devices by Integrating Augmented Reality and Semantic Web

Semantic Description of Plant Phenological Development Stages, Starting with Grapevine

HL7-FHIR-Based ContSys Formal Ontology for Enabling Continuity of Care Data Interoperability

An Approach to Discovery of Customer Profiles

RESEARCH AND PRACTICAL ISSUES OF ENTERPRISE INFORMATION SYSTEMS, 10TH IFIP WG 8.9 WORKING CONFERENCE, CONFENIS 2016

The African Wildlife Ontology tutorial ontologies: requirements, design, and content.


code for satellite system graphs

High Dimensional Similarity Search with Satellite System Graph: Efficiency, Scalability, and Unindexed Query Compatibility

Satellite System Graph: Towards the Efficiency Up-Boundary of Graph-Based Approximate Nearest Neighbor Search.

Worst-case Performance of Popular Approximate Nearest Neighbor Search
  Implementations: Guarantees and Limitations

Fast Approximate Nearest Neighbor Search with a Dynamic Exploration
  Graph using Continuous Refinement


code for "FFJORD: Free-form Continuous Dynamics for Scalable Reversible Generative Models".

Exponential Family Estimation via Adversarial Dynamics Embedding

Normalizing flows for novelty detection in industrial time series data

Interpolation Technique to Speed Up Gradients Propagation in Neural ODEs

Symplectic Adjoint Method for Exact Gradient of Neural ODE with Minimal Memory

Flow-based likelihoods for non-Gaussian inference

Second-Order Neural ODE Optimizer

Non-Gaussian Gaussian Processes for Few-Shot Regression

Interpolated Adjoint Method for Neural ODEs.

Turning Normalizing Flows into Monge Maps with Geodesic Gaussian
  Preserving Flows


Code for visualizing the loss landscape of neural nets

Visualizing the Loss Landscape of Neural Nets

Improving Generalization in Federated Learning by Seeking Flat Minima

Training Larger Networks for Deep Reinforcement Learning

Position-based Scaled Gradient for Model Quantization and Pruning

Prune and Tune Ensembles: Low-Cost Ensemble Learning With Sparse Independent Subnetworks

UPANets: Learning from the Universal Pixel Attention Neworks

DPlis: Boosting Utility of Differentially Private Deep Learning via Randomized Smoothing

Semantic Segmentation of Skin Lesions using a Small Data Set

On the Privacy Risks of Cell-Based NAS Architectures

Proceedings of the 2022 ACM SIGSAC Conference on Computer and Communications Security

HAT4RD: Hierarchical Adversarial Training for Rumor Detection on Social
  Media


iBOT :robot:: Image BERT Pre-Training with Online Tokenizer (ICLR 2022)

iBOT: Image BERT Pre-Training with Online Tokenizer

Towards a Visual-Language Foundation Model for Computational Pathology

Active Finetuning: Exploiting Annotation Budget in the Pretraining-Finetuning Paradigm

Exploring The Role of Mean Teachers in Self-supervised Masked Auto-Encoders

Zero-shot visual reasoning through probabilistic analogical mapping


A Fast and Safe Python based on PyPy

Twine: An Embedded Trusted Runtime for WebAssembly

International Conference on Data Engineering

Dynamic Binary Translation for SGX Enclaves

Understanding TEE Containers, Easy to Use? Hard to Trust

Binary Compatibility For SGX Enclaves.


Code accompanying our papers on the "Generative Distributional Control" framework

Fine-Tuning Language Models from Human Preferences

A Distributional Approach to Controlled Text Generation

On Reinforcement Learning and Distribution Matching for Fine-Tuning
  Language Models with no Catastrophic Forgetting

Controlling Conditional Language Models without Catastrophic Forgetting

Energy-Based Models for Code Generation under Compilability Constraints


Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling.

Offline Reinforcement Learning with Implicit Q-Learning

Online Decision Transformer

CORL: Research-oriented Deep Offline Reinforcement Learning Library

Q-learning Decision Transformer: Leveraging Dynamic Programming for
  Conditional Sequence Modelling in Offline RL

Supported Policy Optimization for Offline Reinforcement Learning

Transformer models: an introduction and catalog

Diffusion Model is an Effective Planner and Data Synthesizer for
  Multi-Task Reinforcement Learning

Beyond Reward: Offline Preference-guided Policy Optimization

Generative Pretraining for Black-Box Optimization


Pre-trained Language Model for Biomedical Question Answering

Pre-trained Language Models in Biomedical Domain: A Systematic Survey

LIQUID: A Framework for List Question Answering Dataset Generation


Image augmentation for classification, localization, detection and semantic segmentation

An Approach for Automated Disassembly of Lithium-Ion Battery Packs and High-Quality Recycling Using Computer Vision, Labeling, and Material Characterization

Center-Articulated Hydrostatic Cotton Harvesting Rover Using Visual-Servoing Control and a Finite State Machine


PathVQA: 30000+ Questions for Medical Visual Question Answering

Towards Visual Question Answering on Pathology Images


Deep Learning Energy Measurement and Optimization

Zeus: Understanding and Optimizing GPU Energy Consumption of DNN
  Training

Chasing Low-Carbon Electricity for Practical and Sustainable DNN
  Training


cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data

High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell

cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps

Cis-topic modelling of single-cell epigenomes

Matrix factorization and transfer learning uncover regulatory biology across multiple single-cell ATAC-seq data sets


A PyTorch Implementation of Federated Learning http://doi.org/10.5281/zenodo.4321561

Think Locally, Act Globally: Federated Learning with Local and Global Representations

Learning Private Neural Language Modeling with Attentive Aggregation

International Joint Conference on Neural Network

Rethinking Privacy Preserving Deep Learning: How to Evaluate and Thwart Privacy Attacks

Federated Learning for Personalized Humor Recognition


Machine Learning inference engine for Microcontrollers and Embedded devices

LPWAN and Embedded Machine Learning as Enablers for the Next Generation of Wearable Devices

DNN Is Not All You Need: Parallelizing Non-neural ML Algorithms on Ultra-low-power IoT Processors

Are Microcontrollers Ready for Deep Learning-Based Human Activity Recognition?

TinyML-Based Fall Detection for Connected Personal Mobility Vehicles

Computers, materials & continua/Computers, materials & continua (Print)

An Open-Source Tool for Classification Models in Resource-Constrained Hardware


Pytorch implementation of various Attention Mechanisms, MLP, Re-parameter, Convolution, which is helpful to further understand papers.⭐⭐⭐

Attention Is All You Need

Squeeze-and-Excitation Networks

CBAM: Convolutional Block Attention Module

ECA-Net: Efficient Channel Attention for Deep Convolutional Neural Networks

Selective Kernel Networks

MLP-Mixer: An all-MLP Architecture for Vision

RepVGG: Making VGG-style ConvNets Great Again

BAM: Bottleneck Attention Module

CoAtNet: Marrying Convolution and Attention for All Data Sizes

Dynamic Convolution: Attention over Convolution Kernels


Import qiime2 artifacts to R

Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome

The Transition From Stochastic to Deterministic Bacterial Community Assembly During Permafrost Thaw Succession

Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome

Persistence of a Core Microbiome Through the Ontogeny of a Multi-Host Parasite

The upper respiratory tract microbiome of indigenous Orang Asli in north-eastern Peninsular Malaysia

Compositional Differences in the Oral Microbiome of E-cigarette Users

Temporal variations in bacterial community diversity and composition throughout intensive care unit renovations

Venomous Snakes Reveal Ecological and Phylogenetic Factors Influencing Variation in Gut and Oral Microbiomes

Efficacy of a topical concentrated surfactant gel on microbial communities in non‐healing diabetic foot ulcers with chronic biofilm infections: A proof‐of‐concept study

Characterization of Microbial Dynamics and Volatile Metabolome Changes During Fermentation of Chambourcin Hybrid Grapes From Two Pennsylvania Regions


RWKV is an RNN with transformer-level LLM performance. It can be directly trained like a GPT (parallelizable). So it's combining the best of RNN and transformer - great performance, fast inference, saves VRAM, fast training, "infinite" ctx_len, and free sentence embedding.

GLU Variants Improve Transformer

SmoothQuant: Accurate and Efficient Post-Training Quantization for Large
  Language Models

RWKV: Reinventing RNNs for the Transformer Era

Hyena Hierarchy: Towards Larger Convolutional Language Models

SpikeGPT: Generative Pre-trained Language Model with Spiking Neural
  Networks

SelfEvolve: A Code Evolution Framework via Large Language Models

Zoology: Measuring and Improving Recall in Efficient Language Models

RRAML: Reinforced Retrieval Augmented Machine Learning


BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model

On the Generation of Medical Dialogues for COVID19

On the Generation of Medical Dialogs for COVID-19

PriMock57: A Dataset Of Primary Care Mock Consultations

On the Generation of Medical Dialogues for COVID-19

Knowledge grounded medical dialogue generation using augmented graphs

Large Language Models Need Holistically Thought in Medical
  Conversational QA

BioNART: A Biomedical Non-AutoRegressive Transformer for Natural Language Generation

Workshop on Biomedical Natural Language Processing


[CVPR'22] Semi-Supervised Semantic Segmentation Using Unreliable Pseudo-Labels

Semi-supervised Semantic Segmentation with Prototype-based Consistency
  Regularization

Augmentation Matters: A Simple-Yet-Effective Approach to Semi-Supervised Semantic Segmentation


Mining individual characters in multiparty dialogue

Emotion Detection on TV Show Transcripts with Sequence-based Convolutional Neural Networks

Character Identification on Multiparty Conversation: Identifying Mentions of Characters in TV Shows

Annual Meeting of the Special Interest Group on Discourse and Dialogue

Automatic Text-based Personality Recognition on Monologues and Multiparty Dialogues Using Attentive Networks and Contextual Embeddings

They Exist! Introducing Plural Mentions to Coreference Resolution and Entity Linking

Text-based automatic personality prediction: a bibliographic review

A Comprehensive Survey on Multi-modal Conversational Emotion Recognition
  with Deep Learning


A package for ontology engineering with deep learning and language models.

BERTMap: A BERT-based Ontology Alignment System

Contextual Semantic Embeddings for Ontology Subsumption Prediction

Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matching

Language Model Analysis for Ontology Subsumption Inference

DeepOnto: A Python Package for Ontology Engineering with Deep Learning

Ontology Enrichment from Texts: A Biomedical Dataset for Concept Discovery and Placement

Contextualized Structural Self-supervised Learning for Ontology Matching


TALLRec: An Effective and Efficient Tuning Framework to Align Large Language Model with Recommendation

Recommender Systems in the Era of Large Language Models (LLMs)


Automated generation of NASA ADS bibtex entries directly from citation keys in your TeX source files

Beyond assembly bias: exploring secondary halo biases for cluster-size haloes

Monthly Notices of the Royal Astronomical Society

First Results from SMAUG: Characterization of Multiphase Galactic Outflows from a Suite of Local Star-forming Galactic Disk Simulations

Efficiently Cooled Stellar Wind Bubbles in Turbulent Clouds. I. Fractal Theory and Application to Star-forming Clouds

Turbulent Gas in Lensed Planck-selected Starbursts at z ∼ 1-3.5

A Framework for Multiphase Galactic Wind Launching Using TIGRESS

Dark energy survey year 3 results: cosmological constraints from the analysis of cosmic shear in harmonic space

Milky Way Satellite Census. IV. Constraints on Decaying Dark Matter from Observations of Milky Way Satellite Galaxies

Simulating intergalactic gas for DESI-like small scale Lymanα
  forest observations

Journal of Cosmology and Astroparticle Physics

Phase-Space Correlations Among Systems of Satellite Galaxies

Star Formation Laws and Efficiencies across 80 Nearby Galaxies


[CVPR 2022 Oral & TPAMI 2024] MixFormer: End-to-End Tracking with Iterative Mixed Attention

SOTVerse: A User-defined Task Space of Single Object Tracking


Code for exploring Based models from "Simple linear attention language models balance the recall-throughput tradeoff"

Zoology: Measuring and Improving Recall in Efficient Language Models

Repeat After Me: Transformers are Better than State Space Models at Copying


EdgeConnect: Structure Guided Image Inpainting using Edge Prediction, ICCV  2019 https://arxiv.org/abs/1901.00212

EdgeConnect: Generative Image Inpainting with Adversarial Edge Learning

Flow-edge Guided Video Completion

Diverse Image Inpainting with Bidirectional and Autoregressive Transformers

Deep Fusion Network for Image Completion

Learning a Sketch Tensor Space for Image Inpainting of Man-made Scenes

Automatic Segmentation and Visualization of Choroid in OCT with Knowledge Infused Deep Learning

IEEE journal of biomedical and health informatics

LaFIn: Generative Landmark Guided Face Inpainting

Iterative facial image inpainting based on an encoder-generator architecture

Pluralistic Image Completion with Probabilistic Mixture-of-Experts


This is the repository containing codes for our CVPR, 2020 paper titled "Learning Individual Speaking Styles for Accurate Lip to Speech Synthesis"

Lip-to-Speech Synthesis for Arbitrary Speakers in the Wild

Proceedings of the 30th ACM International Conference on Multimedia


This is the repo for our Detection of Traffic Anomaly (DoTA) dataset.

When, Where, and What? A New Dataset for Anomaly Detection in Driving Videos

DoTA: Unsupervised Detection of Traffic Anomaly in Driving Videos

IEEE transactions on pattern analysis and machine intelligence

Vision-Based Traffic Accident Detection and Anticipation: A Survey


Data repository for pretrained NLP models and NLP corpora.

Distributed Representations of Words and Phrases and their Compositionality

Efficient Estimation of Word Representations in Vector Space

Bag of Tricks for Efficient Text Classification

Advances in Pre-Training Distributed Word Representations

Magnitude: A Fast, Efficient Universal Vector Embedding Utility Package

When FastText Pays Attention: Efficient Estimation of Word Representations using Constrained Positional Weighting

Contextual Bandits for Advertising Campaigns: A Diffusion-Model
  Independent Approach (Extended Version)

Estimating Glycemic Impact of Cooking Recipes via Online Crowdsourcing and Machine Learning

Proceedings of the 9th International Conference on Digital Public Health

Intrinsic analysis for dual word embedding space models


A Three Party MPC framework for Machine learning and Databases

Privacy-preserving collaborative machine learning on genomic data using TensorFlow

Secrecy: Secure collaborative analytics on secret-shared data

Federated Learning for Intrusion Detection in the Critical Infrastructures: Vertically Partitioned Data Use Case

Compact: Approximating Complex Activation Functions for Secure
  Computation


Code for the paper: Fighting Fake News: Image Splice Detection via Learned Self-Consistency

Noiseprint: a CNN-based camera model fingerprint

Generate, Segment and Refine: Towards Generic Manipulation Segmentation


SPARQL for Tables: Turn CSV into RDF using SPARQL syntax

An overview of graph databases and their applications in the biomedical domain

Database : the journal of biological databases and curation

Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach

Lifting Tabular Data to RDF: A Survey


Deep Reinforcement Learning codes for study. Currently, there are only codes for algorithms: DQN, C51, QR-DQN, IQN, QUOTA.

A Distributional Perspective on Reinforcement Learning

Distributional Reinforcement Learning with Quantile Regression

Implicit Quantile Networks for Distributional Reinforcement Learning

QUOTA: The Quantile Option Architecture for Reinforcement Learning


dataset for lightly supervised training using the librivox audio book recordings. https://librivox.org/.

Libri-Light: A Benchmark for ASR with Limited or No Supervision

International Conference on Acoustics, Speech, and Signal Processing

TERA: Self-Supervised Learning of Transformer Encoder Representation for Speech

IEEE/ACM transactions on audio, speech, and language processing

MLS: A Large-Scale Multilingual Dataset for Speech Research

SLAM: A Unified Encoder for Speech and Language Modeling via Speech-Text Joint Pre-Training

Utilizing Self-supervised Representations for MOS Prediction

Large-Scale Self- and Semi-Supervised Learning for Speech Translation

Guided-TTS 2: A Diffusion Model for High-quality Adaptive Text-to-Speech
  with Untranscribed Data

Magic Dust for Cross-Lingual Adaptation of Monolingual Wav2vec-2.0

Speech Technology for Everyone: Automatic Speech Recognition for Non-Native English with Transfer Learning

Improving End-to-end Speech Translation by Leveraging Auxiliary Speech
  and Text Data


Development kit for MIT Scene Parsing Benchmark

Semantic Understanding of Scenes through the ADE20K Dataset

Scene Classification in Indoor Environments for Robots using Context
  Based Word Embeddings


The repository contains an ongoing collection of tweets IDs associated with the novel coronavirus COVID-19 (SARS-CoV-2), which commenced on January 28, 2020.

Tracking Social Media Discourse About the COVID-19 Pandemic: Development of a Public Coronavirus Twitter Data Set

COVID-19 open source data sets: a comprehensive survey

Detecting Topic and Sentiment Dynamics Due to COVID-19 Pandemic Using Social Media

TweetsCOV19 - A Knowledge Base of Semantically Annotated Tweets about the COVID-19 Pandemic

International Conference on Information and Knowledge Management

A systematic review on AI/ML approaches against COVID-19 outbreak

Multilingual topic modeling for tracking COVID-19 trends based on Facebook data analysis

Applied intelligence (Dordrecht, Netherlands)

How Epidemic Psychology Works on Twitter: Evolution of responses to the
  COVID-19 pandemic in the U.S

Unlink the Link Between COVID-19 and 5G Networks: An NLP and SNA Based Approach

IEEE access : practical innovations, open solutions

"A Virus Has No Religion": Analyzing Islamophobia on Twitter During the COVID-19 Outbreak

A Comparative Study on Distancing, Mask and Vaccine Adoption Rates from Global Twitter Trends


[ICCV 2019] "AutoGAN: Neural Architecture Search for Generative Adversarial Networks" by Xinyu Gong, Shiyu Chang, Yifan Jiang and Zhangyang Wang

GANs Can Play Lottery Tickets Too

Generative Adversarial Networks for Image Augmentation in Agriculture: A
  Systematic Review

Assisting the Adversary to Improve GAN Training


A deep learning toolkit for log-based anomaly detection

DeepLog: Anomaly Detection and Diagnosis from System Logs through Deep Learning

Conference on Computer and Communications Security

Robust log-based anomaly detection on unstable log data

Experience Report: Deep Learning-based System Log Analysis for Anomaly
  Detection

Leveraging Log Instructions in Log-based Anomaly Detection

LogAI: A Library for Log Analytics and Intelligence


Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).

TinoTranscriptDB: A Database of Transcripts and Microsatellite Markers of Tinospora cordifolia, an Important Medicinal Plant

A novel transposable element-based authentication protocol for Drosophila cell lines

Genome-Wide DNA Polymorphism Analysis and Molecular Marker Development for the Setaria italica Variety “SSR41” and Positional Cloning of the Setaria White Leaf Sheath Gene SiWLS1

De Novo Transcriptome Profiling for the Generation and Validation of Microsatellite Markers, Transcription Factors, and Database Development for Andrographis paniculata

International journal of molecular sciences

De novo transcriptome assembly using Illumina sequencing and development of EST-SSR markers in a monoecious herb Sagittaria trifolia Linn

Genome Assembly and Microsatellite Marker Development Using Illumina and PacBio Sequencing in the Carex pumila (Cyperaceae) from Korea


Pytorch implementations of Bayes By Backprop, MC Dropout, SGLD, the Local Reparametrization Trick, KF-Laplace, SG-HMC and more

Bayesian Learning via Stochastic Gradient Langevin Dynamics

International Conference on Machine Learning

Stochastic Gradient Hamiltonian Monte Carlo

A Scalable Laplace Approximation for Neural Networks

International Conference on Learning Representations

Differentially Private Bayesian Neural Networks on Accuracy, Privacy and Reliability

MUBen: Benchmarking the Uncertainty of Molecular Representation Models


YACS -- Yet Another Configuration System

PyRobot: An Open-source Robotics Framework for Research and Benchmarking

PyTorch Connectomics: A Scalable and Flexible Segmentation Framework for
  EM Connectomics

PyRetri: A PyTorch-based Library for Unsupervised Image Retrieval by Deep Convolutional Neural Networks


Rethinking the Value of Network Pruning (Pytorch) (ICLR 2019)

Rethinking the Value of Network Pruning

Do We Actually Need Dense Over-Parameterization? In-Time Over-Parameterization in Sparse Training

Sparse Training via Boosting Pruning Plasticity with Neuroregeneration

Sanity-Checking Pruning Methods: Random Tickets can Win the Jackpot

Automatic Sparse Connectivity Learning for Neural Networks

Rethinking the Pruning Criteria for Convolutional Neural Network

EDropout: Energy-Based Dropout and Pruning of Deep Neural Networks

IEEE transactions on neural networks and learning systems

Structural Watermarking to Deep Neural Networks via Network Channel Pruning

Trainability Preserving Neural Pruning

Paying more attention to snapshots of Iterative Pruning: Improving Model Compression via Ensemble Distillation


Segment-Anything + 3D. Let's lift anything to 3D.

Anything-3D: Towards Single-view Anything Reconstruction in the Wild

Black-box Targeted Adversarial Attack on Segment Anything (SAM)


A single model that parses Universal Dependencies across 75 languages. Given a sentence, jointly predicts part-of-speech tags, morphology tags, lemmas, and dependency trees.

75 Languages, 1 Model: Parsing Universal Dependencies Universally

Cross-Lingual Lemmatization and Morphology Tagging with Two-Stage Multilingual BERT Fine-Tuning

Proceedings of the 16th Workshop on Computational Research in Phonetics, Phonology, and Morphology

Meta-Learning for Fast Cross-Lingual Adaptation in Dependency Parsing

AUTOLEX: An Automatic Framework for Linguistic Exploration


Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

Proteogenomic characterization of pancreatic ductal adenocarcinoma

A Curated Resource for Phosphosite-specific Signature Analysis

Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas

Kinome Array Profiling of Patient-Derived Pancreatic Ductal Adenocarcinoma Identifies Differentially Active Protein Tyrosine Kinases

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα

Proteogenomics of diffuse gliomas reveal molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms

Tumor biology and immune infiltration define primary liver cancer subsets linked to overall survival after immunotherapy

Common Germline Risk Variants Impact Somatic Alterations and Clinical Features across Cancers

Clinically relevant glioblastoma patient-derived xenograft models to guide drug development and identify molecular signatures

Rat Deconvolution as Knowledge Miner for Immune Cell Trafficking from Toxicogenomics Databases


Interpretation of cell states using reference single-cell maps

Interpretation of T cell states from single-cell transcriptomics data using reference atlases

A CD4+ T cell reference map delineates subtype-specific adaptation during acute and chronic viral infections

SPICA: Swiss portal for immune cell analysis

T Cell Clonal Analysis Using Single-cell RNA Sequencing and Reference Maps

Single-cell transcriptome landscape of circulating CD4+ T cell populations in autoimmune diseases


A PyTorch Platform for Distributed RL

IMPALA: Scalable Distributed Deep-RL with Importance Weighted Actor-Learner Architectures

TorchBeast: A PyTorch Platform for Distributed RL

MVFST-RL: An Asynchronous RL Framework for Congestion Control with Delayed Actions.

CORA: Benchmarks, Baselines, and Metrics as a Platform for Continual Reinforcement Learning Agents

Gossip-based Actor-Learner Architectures for Deep Reinforcement Learning

Avalon: A Benchmark for RL Generalization Using Procedurally Generated
  Worlds

Hierarchical Kickstarting for Skill Transfer in Reinforcement Learning

Grid-to-Graph: Flexible Spatial Relational Inductive Biases for Reinforcement Learning

Learning Achievement Structure for Structured Exploration in Domains
  with Sparse Reward


The automatic indexer for Postgres

UDO: Universal Database Optimization using Reinforcement Learning


High level network definitions with pre-trained weights in TensorFlow

Protection Against Reconstruction and Its Applications in Private Federated Learning

Robust Learning from Untrusted Sources

KS(conf ): A Light-Weight Test if a ConvNet Operates Outside of Its Specifications

KS(conf): A Light-Weight Test if a Multiclass Classifier Operates Outside of Its Specifications

International journal of computer vision

Vehicle Counting using Deep Learning Models: A Comparative Study

International journal of advanced computer science and applications/International journal of advanced computer science & applications


Strong baseline for visual question answering

Show, Ask, Attend, and Answer: A Strong Baseline For Visual Question Answering

Explicit Bias Discovery in Visual Question Answering Models

Leveraging Visual Question Answering to Improve Text-to-Image Synthesis


AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

Evolutionary dynamics of multidrug resistant Salmonella enterica serovar 4,[5],12:i:- in Australia

Comparative Genomic Analysis of 450 Strains of Salmonella enterica Isolated from Diseased Animals

Molecular characterization and antimicrobial susceptibility testing of clinical and non-clinical Brucella melitensis and Brucella abortus isolates from Egypt

Comprehensive genome data analysis establishes a triple whammy of carbapenemases, ICEs and multiple clinically relevant bacteria

Analysis of the Molecular Diversity Among Cronobacter Species Isolated From Filth Flies Using Targeted PCR, Pan Genomic DNA Microarray, and Whole Genome Sequencing Analyses

Biosolids as a Source of Antibiotic Resistance Plasmids for Commensal and Pathogenic Bacteria

ICEs Are the Main Reservoirs of the Ciprofloxacin-Modifying crpP Gene in Pseudomonas aeruginosa

Genomic Epidemiology and Antimicrobial Resistance Mechanisms of Imported Typhoid in Australia

Characterization of NDM-5-producing Enterobacteriaceae isolates from retail grass carp (Ctenopharyngodon idella) and evidence of bla(NDM-5)- bearing IncHI2 plasmid transfer between ducks and fish

Metagenomics and Other Omics Approaches to Bacterial Communities and Antimicrobial Resistance Assessment in Aquacultures


S2ORC: The Semantic Scholar Open Research Corpus:  https://www.aclweb.org/anthology/2020.acl-main.447/

Lifelong Pretraining: Continually Adapting Language Models to Emerging Corpora

A Molecular Multimodal Foundation Model Associating Molecule Graphs with
  Natural Language

The Semantic Scholar Open Data Platform

Explaining Relationships Between Scientific Documents

SciFact-Open: Towards open-domain scientific claim verification

Nougat: Neural Optical Understanding for Academic Documents

CiteWorth: Cite-Worthiness Detection for Improved Scientific Document Understanding

Librarian-in-the-Loop: A Natural Language Processing Paradigm for
  Detecting Informal Mentions of Research Data in Academic Literature

Do Discourse Indicators Reflect the Main Arguments in Scientific Papers?


This repository contains the code, data, and models of the paper titled "XL-Sum: Large-Scale Multilingual Abstractive Summarization for 44 Languages" published in Findings of the Association for Computational Linguistics: ACL-IJCNLP 2021.

Bag of Tricks for Efficient Text Classification

IndicBART: A Pre-trained Model for Indic Natural Language Generation

Findings of the Association for Computational Linguistics: ACL 2022

Zero-Shot Cross-Lingual Summarization via Large Language Models

ClidSum: A Benchmark Dataset for Cross-Lingual Dialogue Summarization

IndicNLG Benchmark: Multilingual Datasets for Diverse NLG Tasks in Indic Languages

mFACE: Multilingual Summarization with Factual Consistency Evaluation

BanglaNLG and BanglaT5: Benchmarks and Resources for Evaluating Low-Resource Natural Language Generation in Bangla

MSAMSum: Towards Benchmarking Multi-lingual Dialogue Summarization

Workshop on Document-grounded Dialogue and Conversational Question Answering

Towards Unifying Multi-Lingual and Cross-Lingual Summarization


Repo for LaWGPT, Chinese-Llama tuned with Chinese Legal knowledge. 基于中文法律知识的大语言模型

LawBench: Benchmarking Legal Knowledge of Large Language Models

LAiW: A Chinese Legal Large Language Models Benchmark

Reformulating Domain Adaptation of Large Language Models as
  Adapt-Retrieve-Revise

PanGu-π: Enhancing Language Model Architectures via Nonlinearity
  Compensation

AviationGPT: A Large Language Model for the Aviation Domain

Large Language Models in Law: A Survey


A collection of some datasets for segmentation / saliency detection. Welcome to PR...:smile:

Depth Enhanced Saliency Detection Method

International Conference on Internet Multimedia Computing and Service

Anabranch network for camouflaged object segmentation

Automatic Portrait Segmentation for Image Stylization


Ladder network is a deep learning algorithm that combines supervised and unsupervised learning

Semi-Supervised Learning with Ladder Networks

Semi-supervised convolutional neural networks for human activity recognition

An analysis of over-sampling labeled data in semi-supervised learning with FixMatch

Proceedings of the Northern Lights Deep Learning Workshop


The official repository for ROOT: analyzing, storing and visualizing big data, scientifically

A FAIR and AI-ready Higgs boson decay dataset

C++ Code Generation for Fast Inference of Deep Learning Models in ROOT/TMVA

Integration and Performance of New Technologies in the CMS Simulation

OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)

Modeling protein dynamics in Caenorhabditis elegans embryos reveals that the PLK-1 gradient relies on weakly coupled reaction-diffusion mechanisms.

Proceedings of the National Academy of Sciences of the United States of America

Extending ROOT through Modules

The ALICE Analysis Framework for LHC Run 3

Energy reconstruction of the ATLAS Tile Calorimeter under high pile-up conditions using the Wiener filter


The Roslyn .NET compiler provides C# and Visual Basic languages with rich code analysis APIs.

Learning to Represent Programs with Graphs

A General Path-Based Representation for Predicting Program Properties

Learning Syntactic Program Transformations from Examples

Towards the quality improvement of cross-platform mobile applications

Cross-Language Code Search using Static and Dynamic Analyses

PROCEEDINGS OF THE 29TH ACM JOINT MEETING ON EUROPEAN SOFTWARE ENGINEERING CONFERENCE AND SYMPOSIUM ON THE FOUNDATIONS OF SOFTWARE ENGINEERING (ESEC/FSE '21)

Tolerant parsing with a special kind of «Any» symbol: the algorithm and practical application

Труды Института системного программирования РАН

Modelling of Language Syntax and Semantics: The Case of the Assembler Compiler.

Automated Isolation for White-box Test Generation

KT-BT: A Framework for Knowledge Transfer Through Behavior Trees in Multirobot Systems

White-box software test generation with Microsoft Pex on open source C# projects: A dataset


A command line tool and library for transferring data with URL syntax, supporting DICT, FILE, FTP, FTPS, GOPHER, GOPHERS, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, MQTT, POP3, POP3S, RTMP, RTMPS, RTSP, SCP, SFTP, SMB, SMBS, SMTP, SMTPS, TELNET, TFTP, WS and WSS. libcurl offers a myriad of powerful features

An Empirical Study of the Cost of DNS-over-HTTPS

A Survey on DNS Encryption: Current Development, Malware Misuse, and Inference Techniques

Large Scale Measurement on the Adoption of Encrypted DNS

The Sorry State of TLS Security in Enterprise Interception Appliances

ControlFlag: A Self-Supervised Idiosyncratic Pattern Detection System
  for Software Control Structures

Measuring the Accessibility of Domain Name Encryption and Its Impact on
  Internet Filtering

A QUIC(K) Way Through Your Firewall?

SBFT Tool Competition 2023 - Fuzzing Track

Automatically Tailoring Abstract Interpretation to Custom Usage Scenarios

How Private is Android's Private DNS Setting? Identifying Apps by Encrypted DNS Traffic

Proceedings of the 16th International Conference on Availability, Reliability and Security


A coding-free framework built on PyTorch for reproducible deep learning studies. 25 knowledge distillation methods presented at CVPR, ICLR, ECCV, NeurIPS, ICCV, etc are implemented so far.  Trained models, training logs and configurations are available for ensuring the reproducibiliy and benchmark.

Deep Residual Learning for Image Recognition

BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding

Densely Connected Convolutional Networks

Distilling the Knowledge in a Neural Network

Wide Residual Networks

FitNets: Hints for Thin Deep Nets

Paying More Attention to Attention: Improving the Performance of Convolutional Neural Networks via Attention Transfer

A Gift from Knowledge Distillation: Fast Optimization, Network Minimization and Transfer Learning

Relational Knowledge Distillation

Similarity-Preserving Knowledge Distillation


Functions to support the ICES Transparent Assessment Framework


Automated filling of detail in reported emission scenarios

Silicone v1.0.0: an open-source Python package for inferring missing emissions data for climate change research


Russian GPT3 models.

Generative Language Models and Automated Influence Operations: Emerging
  Threats and Potential Mitigations

AraGPT2: Pre-Trained Transformer for Arabic Language Generation

Fine-tuning GPT-3 for Russian Text Summarization

Methods for Detoxification of Texts for the Russian Language

Russian Paraphrasers: Paraphrase with Transformers

Workshop on Balto-Slavic Natural Language Processing

It’s Basically the Same Language Anyway: the Case for a Nordic Language Model

Nordic Conference of Computational Linguistics

TAPE: Assessing Few-shot Russian Language Understanding

Argumentative Text Generation in Economic Domain

Computational Linguistics and Intellectual Technologies

Russian SuperGLUE 1.1: Revising the Lessons not Learned by Russian NLP
  models

Complex use of hormonal drugs to re-store sexual cyclicity in cows


ICLR2024 Spotlight: curation/training code, metadata, distribution and pre-trained models for MetaCLIP; CVPR 2024: MoDE: CLIP Data Experts via Clustering

Scaling Up Visual and Vision-Language Representation Learning With Noisy Text Supervision

LAION-5B: An open large-scale dataset for training next generation
  image-text models

LAION-400M: Open Dataset of CLIP-Filtered 400 Million Image-Text Pairs

Demystifying CLIP Data


Configuration Space Covariances for Projected Galaxy 2-Point Statistics

Dark Energy Survey Year 3 results: Cosmology from cosmic shear and robustness to data calibration

Dark Energy Survey Year 3 results: Cosmology from cosmic shear and robustness to modeling uncertainty

Cosmology from Clustering, Cosmic Shear, CMB Lensing, and Cross Correlations: Combining Rubin Observatory and Simons Observatory

Modeling intrinsic galaxy alignment in the MICE simulation

Accelerating cosmological inference with Gaussian processes and neural
  networks -- an application to LSST Y1 weak lensing and galaxy clustering

Galaxy clustering in harmonic space from the dark energy survey year 1 data: compatibility with real-space results

ShapePipe: a new shape measurement pipeline and weak-lensing application
  to UNIONS/CFIS data

Euclid: Covariance of weak lensing pseudo-Cℓ estimates

A joint Roman Space Telescope and Rubin Observatory synthetic wide-field imaging survey

Monthly Notices of the Royal Astronomical Society

Cosmology from weak lensing, galaxy clustering, CMB lensing and tSZ: I. 10× 2pt Modelling Methodology

Monthly notices of the Royal Astronomical Society


Official implementation of CVPR2020 paper "VIBE: Video Inference for Human Body Pose and Shape Estimation"

Recent Advances of Monocular 2D and 3D Human Pose Estimation: A Deep Learning Perspective

SmoothNet: A Plug-and-Play Network for Refining Human Poses in Videos

Video-Based Pose Estimation for Gait Analysis in Stroke Survivors during Clinical Assessments: A Proof-of-Concept Study


The FlexFringe tool for flexible learning of state machines (deterministic automata) from traces. See the paper at https://arxiv.org/abs/2203.16331

FlexFringe: Modeling Software Behavior by Learning Probabilistic
  Automata

Learning Task Automata for Reinforcement Learning using Hidden Markov
  Models


Luminous Type II Short-Plateau Supernovae 2006Y, 2006ai, and 2016egz: A Transitional Class from Stripped Massive Red Supergiants

The Automated Photometry of Transients pipeline (AutoPhOT)

Limits on Simultaneous and Delayed Optical Emission from Well-localized Fast Radio Bursts

A Shock Flash Breaking Out of a Dusty Red Supergiant


The Model for Economic Tipping (point) Analysis

Economic impacts of melting of the Antarctic Ice Sheet


A fast, accurate estimator for small shear distortion.

Weak gravitational lensing shear measurement with FPFS: analytical mitigation of noise bias and selection bias

Analytical weak-lensing shear responses of galaxy properties and galaxy detection

A Differentiable Perturbation-based Weak Lensing Shear Estimator


phylogenetic analyses informed by deep mutational scanning data

Identification of positive selection in genes is greatly improved by using experimentally informed site-specific models

phydms: software for phylogenetic analyses informed by deep mutational scanning

Systematically testing human HMBS missense variants to reveal mechanism and pathogenic variation

bioRxiv : the preprint server for biology


Spectral energy distribution construction and analysis tools

Retrieval of the d/sdL7+T7.5p Binary SDSS J1416+1348AB

A Reanalysis of the Fundamental Parameters and Age of TRAPPIST-1

The First Retrieval of a Substellar Subdwarf: A Cloud-free SDSS J125637.13–022452.4

Individual dynamical masses of DENIS J063001.4−184014AB reveal a likely young brown dwarf triple

A Comparative L-dwarf Sample Exploring the Interplay between Atmospheric Assumptions and Data Properties


Spectral Clustering for Interstellar Molecular Emission Segmentation

The integrated properties of the molecular clouds from the JCMT CO(3–2) High-Resolution Survey

The SEDIGISM survey: molecular clouds in the inner Galaxy

SEDIGISM-ATLASGAL: dense gas fraction and star formation efficiency across the Galactic disc

The SEDIGISM survey: Molecular cloud morphology


"DenseFusion: 6D Object Pose Estimation by Iterative Dense Fusion" code repository

MoreFusion: Multi-object Reasoning for 6D Pose Estimation from Volumetric Fusion

Object-RPE: Dense 3D Reconstruction and Pose Estimation with Convolutional Neural Networks for Warehouse Robots


Repository for Chemical Perception Sampling Tools

Escaping Atom Types in Force Fields Using Direct Chemical Perception

Journal of chemical theory and computation

Toward Learned Chemical Perception of Force Field Typing Rules

Open Force Field Consortium: Escaping atom types using direct chemical perception with SMIRNOFF v0.1

ChemPer: An Open Source Tool for Automatically Generating SMIRKS Patterns


Pleiotropy-informed conditional and conjunctional false discovery rate

Polygenic overlap and shared genetic loci between loneliness, severe mental disorders, and cardiovascular disease risk factors suggest shared molecular mechanisms

Characterizing the Genetic Overlap Between Psychiatric Disorders and Sleep-Related Phenotypes

The genetic architecture of the human thalamus and its overlap with ten common brain disorders

Genetic Overlap Between Alzheimer's Disease and Depression Mapped Onto the Brain

Identification of novel genomic risk loci shared between common epilepsies and psychiatric disorders

Shared genetic loci between Alzheimer's disease and multiple sclerosis: Crossroads between neurodegeneration and immune system

Multivariate genetic analysis of personality and cognitive traits reveals abundant pleiotropy and improves prediction

Metabolic Overlap between Alzheimer’s Disease and Metabolic Syndrome Identifies the PVRL2 Gene as a New Modulator of Diabetic Dyslipidemia

International journal of molecular sciences

Integrative Identification of Genetic Loci Jointly Influencing Diabetes-Related Traits and Sleep Traits of Insomnia, Sleep Duration, and Chronotypes


Library for length agnostic SIMD intrinsic support and the corresponding math operations

kEDM: A Performance-portable Implementation of Empirical Dynamic Modeling using Kokkos

Practice and Experience in Advanced Research Computing

From Merging Frameworks to Merging Stars: Experiences using HPX, Kokkos and SIMD Types

Stellar Mergers with HPX-Kokkos and SYCL: Methods of using an Asynchronous Many-Task Runtime System with SYCL


McLuster - a tool to make a star cluster

Formation of massive black holes in galactic nuclei: runaway tidal encounters

Direct N-body simulations of globular clusters - II. Palomar 4

Complete ejection of OB stars from very young star clusters and the formation of multiple populations

EXPLODING SATELLITES—THE TIDAL DEBRIS OF THE ULTRA-FAINT DWARF GALAXY HERCULES

Direct N-body simulations of globular clusters – III. Palomar 4 on an eccentric orbit

The effect of primordial mass segregation on the size scale of globular clusters

A Monte Carlo study of early gas expulsion and evolution of star clusters: new simulations with the MOCCA code in the amuse framework

MOCCA: Dynamics and evolution of binary stars of multiple stellar
  populations in tidally filling and underfilling globular star clusters


Modelling and optimal control of single- and multiple-kite systems for airborne wind energy

Wake characteristics of pumping mode airborne wind energy systems

Validation of the quasi-steady performance model for pumping airborne wind energy systems

SCIENCE OF MAKING TORQUE FROM WIND (TORQUE 2020), PTS 1-5

AWEbox: An Optimal Control Framework for Single- and Multi-Aircraft Airborne Wind Energy Systems

Offshore and onshore ground-generation airborne wind energy
power curve characterization


Geothermal Cloud for Machine Learning

Discovering hidden geothermal signatures using non-negative matrix factorization with customized k-means clustering

GeoThermalCloud: Machine Learning for Geothermal Resource Exploration

GeoThermalCloud: Machine Learning for Discovery, Exploration, and Development of Hidden Geothermal Resources


A Python framework, library, and set of tools for exploring, developing, and evaluating quantum error-correction protocols.

Demonstration of fault-tolerant universal quantum gate operations

Advances in compilation for quantum hardware -- A demonstration of magic
  state distillation and repeat-until-success protocols


Differentiable strong lens modelling on CPUs and GPUs

Using wavelets to capture deviations from smoothness in galaxy-scale strong lenses

Modeling lens potentials with continuous neural fields in galaxy-scale strong lenses


The third major version of the MUltiScale Coupling Library and Environment

Non-intrusive and semi-intrusive uncertainty quantification of a multiscale in-stent restenosis model

VECMAtk: a scalable verification, validation and uncertainty quantification toolkit for scientific simulations

Philosophical transactions. Series A, Mathematical, physical, and engineering sciences

Easing Multiscale Model Design and Coupling with MUSCLE 3

Tutorial applications for Verification, Validation and Uncertainty Quantification using VECMA toolkit

Building a turbulence-transport workflow incorporating uncertainty quantification for predicting core profiles in a tokamak plasma


Primer schemes for real-time genome epidemiology

Two-component spike nanoparticle vaccine protects macaques from SARS-CoV-2 infection

Optimization of the SARS-CoV-2 ARTIC Network V4 Primers and Whole Genome Sequencing Protocol

COVA1-18 neutralizing antibody protects against SARS-CoV-2 in three preclinical models


Agent-based simulator for two sided urban mobility markets

Evolution of labour supply in ridesourcing

MaaSSim - agent-based two-sided mobility platform simulator.

Modelling the Rise and Fall of Two-Sided Mobility Markets with
  Microsimulation


Automatic Differentiation Library for Computational and Mathematical Engineering

Learning constitutive relations from indirect observations using deep neural networks

A general approach to seismic inversion with automatic differentiation

Integrating Deep Neural Networks with Full-waveform Inversion: Reparametrization, Regularization, and Uncertainty Quantification

ADCME: Learning Spatially-varying Physical Fields using Deep Neural Networks.

Inverse modeling of viscoelasticity materials using physics constrained learning

Solving Inverse Problems in Steady-State Navier-Stokes Equations using
  Deep Neural Networks

Distributed Machine Learning for Computational Engineering using MPI

Adversarial Numerical Analysis for Inverse Problems

Learning Hidden Dynamics using Intelligent Automatic Differentiation

Trust Region Method for Coupled Systems of PDE Solvers and Deep Neural Networks.


Locus and lineage tests for bacterial GWAS

Panton–Valentine leucocidin is the key determinant of Staphylococcus aureus pyomyositis in a bacterial GWAS

Current Affairs of Microbial Genome-Wide Association Studies: Approaches, Bottlenecks and Analytical Pitfalls

Antimicrobial resistance determinants are associated with Staphylococcus aureus bacteraemia and adaptation to the hospital environment: a bacterial genome-wide association study


Statistically Significant loops from HiChIP data

Identification of significant chromatin contacts from HiChIP data by FitHiChIP

FitHiChIP: Identification of significant chromatin contacts from HiChIP data

Non-Coding Variants in Cancer: Mechanistic Insights and Clinical Potential for Personalized Medicine

Multidimensional profiling reveals GATA1-modulated stage-specific chromatin states and functional associations during human erythropoiesis


Computing homology of directed flag complexes (based on https://github.com/Ripser/ripser). Online version: https://homepages.abdn.ac.uk/neurotopology/flagser.html

Computing Persistent Homology of Directed Flag Complexes

Impact of higher order network structure on emergent cortical activity

Same But Different: Distance Correlations Between Topological Summaries

Complexes of tournaments, directionality filtrations and persistent homology

MCMC Sampling of Directed Flag Complexes with Fixed Undirected Graphs


R package to conduct univariate and bivariate wavelet analyses

Unraveling the Transmission Ecology of Polio

Rainfall trends and variation in the Maasai Mara ecosystem and their implications for animal population and biodiversity dynamics

Annually resolved Atlantic sea surface temperature variability over the past 2,900 y

Some coral diseases track climate oscillations in the Caribbean

Rare ground data confirm significant warming and drying in western equatorial Africa

Scientific drilling of Lake Chalco, Basin of Mexico (MexiDrill)

Safe haven, hedge and diversification for African stocks: cryptocurrencies versus gold in time-frequency perspective

West Nile virus transmission potential in Portugal

Insolation and Greenhouse Gas Forcing of the South American Monsoon System Across Three Glacial-Interglacial Cycles

Recent fire activity in the boreal eastern interior of North America is below that of the past 2000 yr