Open source release of the evaluation benchmark suite described in  "Realistic Evaluation of Deep Semi-Supervised Learning Algorithms"


Interpretation of cell states using reference single-cell maps


A collection of offline reinforcement learning algorithms. This is a mirror repo from https://agit.ai/Polixir/OfflineRL


Signal based nanopore RNA demultiplexing with convolutional neural networks


Meandering In Networks of Entities to Reach Verisimilar Answers


Code release for Learning with Opponent-Learning Awareness and variations.


SCARV: a side-channel hardened RISC-V platform


Data and code for Kang et al., NAACL 2018's paper titled "A Dataset of Peer Reviews (PeerRead): Collection, Insights and NLP Applications"


MultiNest is a Bayesian inference tool which calculates the evidence and explores the parameter space which may contain multiple posterior modes and pronounced (curving) degeneracies in moderately high dimensions.


Pytorch implementation of DCGAN, WGAN-CP, WGAN-GP


Repository for the SCALE-MAMBA MPC system


A repository for explaining feature attributions and feature interactions in deep neural networks.


TensorFlow port of PyTorch Image Models (timm) - image models with pretrained weights.


List of papers, code and experiments using deep learning for time series forecasting


Tensor Train Toolbox


Optical ray tracing for luminescent materials and spectral converter photovoltaic devices


This repo accompanies the research paper, ARKitScenes - A Diverse Real-World Dataset for 3D Indoor Scene Understanding Using Mobile RGB-D Data and contains the data, scripts to visualize and process assets, and training code described in our paper.


RL starter files in order to immediatly train, visualize and evaluate an agent without writing any line of code


Random Integrators for many-body quantum systems


PDEBench: An Extensive Benchmark for Scientific Machine Learning


Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.


Scalable 1D Gaussian Processes in C++, Python, and Julia


This is the official implementation of Multi-Agent PPO (MAPPO).


Python Keyphrase Extraction module


robomimic: A Modular Framework for Robot Learning from Demonstration


HYDrologic Remote sensing Analysis for Floods Python package


Industrial Benchmark


Offshore Renewable Balance-of-system Installation Tool (ORBIT)


Development of homotopy type theory in Agda


The Chroma Software System for Lattice QCD


A machine learning benchmark of in-the-wild distribution shifts, with data loaders, evaluators, and default models.


YMIR, a streamlined model development product.


Synthetic graph generator for the LDBC Social Network Benchmark, running on Spark


VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through high-contrast imaging.


Basic constrained RL agents used in experiments for the "Benchmarking Safe Exploration in Deep Reinforcement Learning" paper.


The Official PyTorch Implementation of "LSGM: Score-based Generative Modeling in Latent Space" (NeurIPS 2021)


PyTorch implementation of the position-aware attention model for relation extraction


[CVPR22] Official Implementation of DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation


astromonical fits image for python matplotlib


PyTorch implementation of our IJCV paper: "Manhattan Room Layout Reconstruction from a Single 360 image: A Comparative Study of State-of-the-art Methods"


Automatically exported from code.google.com/p/prottest3


Reasoning Over Knowledge Graph Paths for Recommendation


Hierarchical Graph Pooling with Structure Learning


Elucidating the Design Space of Diffusion-Based Generative Models (EDM)


KITTI Odometry Evaluation Toolbox


A public endoscopic video dataset for polyp detection


Code release for  Universal Domain Adaptation(CVPR 2019)


PokéMon like game on iOS with Location Based Service.


code associated with crane-nature-2015, 10.1038/nature14450


Deep-learning model presented in "DataStories at SemEval-2017 Task 4: Deep LSTM with Attention for Message-level and Topic-based Sentiment Analysis".


Reference code for the paper HistoGAN: Controlling Colors of GAN-Generated and Real Images via Color Histograms (CVPR 2021).


Soil-Water-Balance: A Modified Thornthwaite-Mather Soil-Water-Balance Code for Estimating Groundwater Recharge.


MoCoGAN: Decomposing Motion and Content for Video Generation


This is a pytorch implementation of the paper: StarGAN-VC: Non-parallel many-to-many voice conversion with star generative adversarial networks


Camera Style Adaptation for Person Re-identification CVPR 2018


Library of swarm optimization algorithms.


Code for paper: DivideMix: Learning with Noisy Labels as Semi-supervised Learning


Enhanced version of the FastQTL QTL mapper


Official code release for "GRAF: Generative Radiance Fields for 3D-Aware Image Synthesis"


MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration


:fire: [CVPR 2020] STEFANN: Scene Text Editor using Font Adaptive Neural Network (official code).


Cenote-Taker2: Discover and Annotate Divergent Viral Contigs


Text Simplification System and Dataset


Neural generation model for Open Information Extraction


Stanford CoNLL 2018 Graph-based Dependency Parser


Framework for Analysis of Class-Incremental Learning with 12 state-of-the-art methods and 3 baselines.


Dfam Transposable Element Tools Docker container.


Code for the NAACL 2022 long paper "DiffCSE: Difference-based Contrastive Learning for Sentence Embeddings"


Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package


Demultiplexes a fastq.


Generalized lasso implementations


A codebase & model zoo for pretrained backbone based on MegEngine.


This is an official implementation of Unfolding the Alternating Optimization for Blind Super Resolution


Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries


A land use land cover disaggregation and change detection model


Data-driven Network-based Bayesian Inference of Drivers


Security and Privacy Risk Simulator for Machine Learning


Several data modalities for KBs (visual, numerical, temporal, etc.)


An easy to use tool for cryptanalysis of symmetric primitives based on SMT/SAT solvers.


A Fast and Safe Python based on PyPy


Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (DEPRECATED)


Creative Commons Attribution 4.0 International

Chemical Methods Ontology


Python package and data files for manipulating phonological segments (phones, phonemes) in terms of universal phonological features.


An R package for the extraction of sentiment and sentiment-based plot arcs from text


Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109


Thermodynamics and Phase Equilibrium component of Chemical Engineering Design Library (ChEDL)


A curated list of articles that cover the software engineering best practices for building machine learning applications.


InterpretDL: Interpretation of Deep Learning Models，基于『飞桨』的模型可解释性算法库。


scikit-fmm is a Python extension module which implements the fast marching method.


HYBRID is a modeling toolset to assess the integration and economic viability of Integrated Energy Systems (IES).


Easy Reduced Basis method


A differentiable PDE solving framework for machine learning


Astrophysics program simulating the evolution of star systems based on the fast multipole method on adaptive Octrees


Python code related to DM calculations, estimations, and analysis


An algorithm for recovering haplotypes from metagenomes


Official Pytorch implementation of Scene Representation Networks: Continuous 3D-Structure-Aware Neural Scene Representations


Unsupervised Neural Machine Translation


Galaxy Line Emission & Absorption Modeling


KG-BART: Knowledge Graph-Augmented BART for GenerativeCommonsense Reasoning


OpenGL Powered Pretext Contact Map Viewer


Implementation of the Convolution Neural Network for factoid QA on the answer sentence selection task


CWL+Singularity implementation of an RNA editing workflow


Global phylogenies of SARS-CoV-2 sequences


VQMT: Video Quality Measurement Tool. Fast implementations of the following objective image quality metrics: PSNR, SSIM,  MS-SSIM, VIFp, PSNR-HVS and PSNR-HVS-M.


Personalizing Dialogue Agents via Meta-Learning


Data about the past and current structure of the Lightning Network


Code for generating Higher-order Network (HON) from data with higher-order dependencies


A Pytorch implementation of DeepCrack and RoadNet projects.


VQ-VAE for Acoustic Unit Discovery and Voice Conversion


Source code for Neural Information Processing Systems (NeurIPS) 2018 paper "Multi-Task Learning as Multi-Objective Optimization"


Torrent Mapping Alignment Program


A BERT-based Chinese Text Encoder Enhanced by N-gram Representations


This repository implements our ACL Findings 2022 research paper RelationPrompt: Leveraging Prompts to Generate Synthetic Data for Zero-Shot Relation Triplet Extraction. The goal of Zero-Shot Relation Triplet Extraction (ZeroRTE) is to extract relation triplets of the format (head entity, tail entity, relation), despite not having annotated data for the test relation labels.


Understanding emotions from audio files using neural networks and multiple datasets.


a Sparse Direct Solver modulo p


A Python sandbox for decision making in dynamics


a Realistic and Rich 3D Environment


A Python Library for High-Level Semantic Segmentation Models based on TensorFlow and Keras with pretrained backbones.


A high-level, easy-to-deploy non-uniform Fast Fourier Transform in PyTorch.


General tools for Astronomical Time Series in Python


Avalanche fork adding RL support


A Python client for the Radiant MLHub API (https://mlhub.earth).


A framework for Big Data Optimization with multi-objective metaheuristics


Pythonic photometric redshift tools based on EAZY


Soft Active Matter on Surfaces


An Automated Theorem Prover for Classical Higher-Order Logic with Henkin Semantics


Python functions for reading kaldi data formats. Useful for rapid prototyping with python.


1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates


A collection of papers on the topic of ``Computer Vision in the Wild (CVinW)''


Gene set variation analysis


museval - source separation evaluation tools for python


A Toolbox for Post-Processing Quantum Chemical Wavefunction Data


R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework


Parallel nested sampling


python Toolbox for the Evaluation of Soil Moisture Observations


Liquid Tensor Experiment


Python Framework to analyse Git repositories


Official implementations for various pre-training models of ERNIE-family, covering topics of Language Understanding & Generation, Multimodal Understanding & Generation, and beyond.


Norwegian Earth System Model and Documentation


A repository for learning various heap exploitation techniques.


SOTA Math Opensource LLM


The source code of NIPS17 'Universal Style Transfer via Feature Transforms'.


This dataset contains 108,463 human-labeled and 656k noisily labeled pairs that feature the importance of modeling structure, context, and word order information for the problem of paraphrase identification.


Attempting to replicate "A Deep Reinforcement Learning Framework for the Financial Portfolio Management Problem" https://arxiv.org/abs/1706.10059 (and an openai gym environment)


dN/dS methods to quantify selection in cancer and somatic evolution


[CVPR 2021] Closed-Form Factorization of Latent Semantics in GANs


Conditional implementation for NVIDIA's StyleGAN architecture


Official code of The Devil is in the Details: Delving into Unbiased Data Processing for Human Pose Estimation


Detection of Molecules plugin for ImageJ, Utrecht University


A python package for benchmarking interpretability techniques on Transformers.


MATLAB-based solver package of Maxwell's equations by the FDFD method


NAACL2021 - COIL Contextualized Lexical Retriever


Lstm variational auto-encoder for time series anomaly detection and features extraction


End-to-end model training and deployment reference for handwritten Chinese text recognition, and can also be extended to other languages.


Random Erasing Data Augmentation. Experiments on CIFAR10, CIFAR100 and Fashion-MNIST


QTL-seq pipeline to identify causative mutations responsible for a phenotype


Scripts for batch rendering models using Blender. Tested with models from stanfords shapenet library.


[ACL-IJCNLP 2021] Automated Concatenation of Embeddings for Structured Prediction


Tutorials on how to implement a few key architectures for image classification using PyTorch and TorchVision.


PointFlow : 3D Point Cloud Generation with Continuous Normalizing Flows


This is the code for our KILT leaderboard submissions (KGI + Re2G models).


Efficient optimal control solvers for robotic systems.


Learn and L3 embedding from audio/video pairs


Optical Tweezers Toolbox (Version 1)


Pytorch port of Google Research's VGGish model used for extracting audio features.


Scalable Multi-Hop Relational Reasoning for Knowledge-Aware Question Answering (EMNLP 2020)


Soft Actor-Critic


Framework to imitate writing styles using deep learning


Official implementation of VQMIVC: One-shot (any-to-any) Voice Conversion @ Interspeech 2021 + Online playing demo!


Discontinuous Data-Oriented Parsing


CSI: Novelty Detection via Contrastive Learning on Distributionally Shifted Instances (NeurIPS 2020)


CityGML 3.0 Conceptional Model


A set of tools for processing of spatial and temporal disaggregations.


Clustering through Imputation and Dimensionality Reduction


Reinforcement learning algorithms in RLlib


Track and predict the energy consumption and carbon footprint of training deep learning models.


Multi-Output Gaussian Process Toolkit


PyTorch implementation of SimCLR: A Simple Framework for Contrastive Learning of Visual Representations by T. Chen et al.


A library for manipulating DMRS structures


XRay Estimation and Refinement Using Similarity (XERUS)


R package to estimate public transport emissions based on GTFS data


A 3D vision library from 2D keypoints: monocular and stereo 3D detection for humans, social distancing, and body orientation.


Different implementations of "Weighted Prediction Error" for speech dereverberation


chimeraviz is an R package that automates the creation of chimeric RNA visualizations.


Code for the General Lake Model


Fixes contractions such as `you're` to `you are`


MS2PIP: MS2 Peak Intensity Prediction


On the Variance of the Adaptive Learning Rate and Beyond


Fast transit light curves models in Python.


A library for mining of path-based representations of code (and more)


DL1 HDF5 format IACT data writer + reader + processor


Repository supporting the implementation of FAIR principles in the IPCC-WGI Atlas


Low level access to RISC-V processors


Collect and disseminate information on fee-based Open Access publishing


My implementation of the original GAT paper (Veličković et al.). I've additionally included the playground.py file for visualizing the Cora dataset, GAT embeddings, an attention mechanism, and entropy histograms. I've supported both Cora (transductive) and PPI (inductive) examples!


基于RFBNET实现对无人机航拍图中电力杆塔，输电线的异常检测


A comparison of different Oxford Nanopore basecallers


Caffe: a fast open framework for deep learning.


It's a repository for implementations of neural speech editing algorithms.


Implementaion of S-DCNet (ICCV 2019)


A parallel-tempered version of emcee.


Implementation for <Large-Margin Softmax Loss for Convolutional Neural Networks> in ICML'16.


Manual extraction of JWST NIRSpec spectra


An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.


Unsupervised  Extractive Summarization based on Position-Augmented Centrality


Implementation of DeepDB: Learn from Data, not from Queries!


[NeurIPS 2019] Learning Imbalanced Datasets with Label-Distribution-Aware Margin Loss


JAMP - Just Another Metabarcoding Pipeline


Vision-Language Pre-training for Image Captioning and Question Answering


Code for One-shot Relational Learning for Knowledge Graphs (EMNLP18)


Explore and share your scRNAseq clustering results


REDItools are python scripts to investigate RNA editing at genomic scale.


Learning to Cluster Faces (CVPR 2019, CVPR 2020)


Microsoft Azure Traces


VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison


V2X simulator


code for "Neural Jump Ordinary Differential Equations"


MoverScore: Text Generation Evaluating with Contextualized Embeddings and Earth Mover Distance


[ECCV 2022] CelebV-HQ: A Large-Scale Video Facial Attributes Dataset


Kaldi-based Korean ASR (한국어 음성인식) open-source project


alpha-beta-CROWN: An Efficient, Scalable and GPU Accelerated Neural Network Verifier (winner of VNN-COMP 2021 and 2022)


Standard Nomenclature for PV Systems


pytorch implementation of openai paper "Glow: Generative Flow with Invertible 1×1 Convolutions"


Robust evasion attacks against neural network to find adversarial examples


tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies


LASSO for GWAS with summary statistics


AUTO is a publicly available software for continuation and bifurcation problems in ordinary differential equations originally written in 1980 and widely used in the dynamical systems community.


FMIFlux.jl is a free-to-use software library for the Julia programming language, which offers the ability to place FMUs (fmi-standard.org) everywhere inside of your ML topologies and still keep the resulting model trainable with a standard (or custom) FluxML training process.


Official Implement of "ADBench: Anomaly Detection Benchmark", NeurIPS 2023.


Python API for LVIS Dataset


Modular Assessment of Rainfall-Runoff Models Toolbox - Matlab code for 47 conceptual hydrologic models


Multilingual word vectors in 78 languages


In silico chemical library engine for high-accuracy chemical property prediction


Python package for eigenchannels, vibrations and inelastic electron transport based on SIESTA/TranSIESTA DFT


Partial Volume Correction in PET


NCRF++, a Neural Sequence Labeling Toolkit. Easy use to any sequence labeling tasks (e.g. NER, POS, Segmentation). It includes character LSTM/CNN, word LSTM/CNN and softmax/CRF components.


Data catalog for the Microsoft Planetary Computer


A cross-platform and ultrafast toolkit for FASTA/Q file manipulation


Error-bounded Lossy Data Compressor (for floating-point/integer datasets)


A detailed transport sector model.


rrtools: Tools for Writing Reproducible Research in R


A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)


Neutrino oscillation software using SQuIDS.


Neural Network Verification Software Tool


Large scale and asynchronous Hyperparameter and Architecture Optimization at your fingertips.


Package for dynamical modeling of power grids


Grid Singularity Energy Exchange


PRAW, an acronym for "Python Reddit API Wrapper", is a python package that allows for simple access to Reddit's API.


HoloGAN


PyTorch implementation of "Simple and Deep Graph Convolutional Networks"


Codes accompanying the paper "DOP: Off-Policy Multi-Agent Decomposed Policy Gradients" (ICLR 2021, https://arxiv.org/abs/2007.12322)


The global fossil fuel supply chain, mapped at the asset-level.


An extension layer that makes it easier to build complex networks in Mininet


AFL/QEMU fuzzing with full-system emulation.


The official repository of the 2019 Kidney and Kidney Tumor Segmentation Challenge


Faster R-CNN / R-FCN :bulb: C++ version based on Caffe


EMNLP 2021 - Pre-training architectures for dense retrieval


Meta-Baseline: Exploring Simple Meta-Learning for Few-Shot Learning, in ICCV 2021


Deep Reinforcement Learning For Sequence to Sequence Models


offical seesawfacenet pytorch implement,  https://arxiv.org/abs/1908.09124


Artefact for "CoCoNuT: Combining Context-Aware Neural Translation Models using Ensemble for Program Repair."


FMA: A Dataset For Music Analysis


This repository contains data indexes from NIST's Genome in a Bottle project.


Codebase for the paper LSTM Fully Convolutional Networks for Time Series Classification


:thought_balloon: Diffusion Probabilistic Models for 3D Point Cloud Generation (CVPR 2021)


A standalone end-to-end data analysis pipeline for Duplex Sequencing


Linear Prediction Model with Automated Feature Engineering and Selection Capabilities


Codebase for CVPR2020 A Local-to-Global Approach to Multi-modal Movie Scene Segmentation


K2 systematics correction using Gaussian processes


The CosmoSIS parameter estimation library.


A Python toolbox/library for reality-centric machine learning/deep learning on partially-observed time series with PyTorch, including SOTA models supporting tasks of imputation, classification, clustering, and forecasting on incomplete (irregularly-sampled) multivariate time series with missing values/data. https://arxiv.org/abs/2305.18811


OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning


PyTorch Framework for Developing Memory Efficient Deep Invertible Networks


A Python wrapper of the Yandex Mystem 3.1 morphological analyzer (http://api.yandex.ru/mystem). The original tool is shipped as a binary and this library makes it easy to integrate it in Python projects. Let us know in the issues if you would like to be involved into the developments or maintenance of this project. If you have any fix or suggestion, please make a pull request. We are very open to accepting any contributions.


R interface to the fishbase.org database


OpenModelica Microgrid Gym (OMG): An OpenAI Gym Environment for Microgrids


A Python interface to the 6S Radiative Transfer Model


InternVideo: General Video Foundation Models via Generative and Discriminative Learning (https://arxiv.org/abs/2212.03191)


Python package for hypergraph analysis and visualization.


ETH Robustness Analyzer for Deep Neural Networks


Surrogate Modeling Toolbox


DESI Targeting


Deep Learning tools for brain medical images


BookNLP, a natural language processing pipeline for books


This is our implementation of EHCF: Efficient Heterogeneous Collaborative Filtering (AAAI 2020)


Representation Learning and Representation Fusion for computer vision, semantic scene understanding, and robotics.


Rphenograph: R implementation of the PhenoGraph algorithm


Official code for Score-Based Generative Modeling through Stochastic Differential Equations (ICLR 2021, Oral)


The official code repo of "HTS-AT: A Hierarchical Token-Semantic Audio Transformer for Sound Classification and Detection"


A library that implements fairness-aware machine learning algorithms


Improving Convolutional Networks via Attention Transfer (ICLR 2017)


This repository contains code and dataset for the task crack segmentation using two architectures UNet_VGG16, UNet_Resnet and DenseNet-Tiramusu


Disentangled and Controllable Face Image Generation via 3D Imitative-Contrastive Learning (CVPR 2020 Oral)


samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.


Code for the paper "Large-Scale Study of Curiosity-Driven Learning"


Distilling Knowledge via Knowledge Review, CVPR 2021


methods for functional summary-based imputation


Harmonization of multi-site imaging data with ComBat


A collection of python scripts that deal with VASP outpts, e.g. WAVECAR, POTCAR etc.


Benchmarks for the Optimal Power Flow Problem


A package to download ECMWF open data


Venn Diagram by ggplot2, with really easy-to-use API.


LSTM language model with CNN over characters


StyleGAN Encoder - converts real images to latent space


Methylation/modified base calling separated from basecalling.


Evolution Strategies in JAX


The DRAT-trim proof checker


X Inertial-aided Visual Odometry


Current version of the SuperLearner R package


PyTorch Toolbox for Image Quality Assessment, including LPIPS, FID, NIQE, NRQM(Ma), MUSIQ, NIMA, DBCNN, WaDIQaM, BRISQUE, PI and more...


pyltp: the python extension for LTP


Deep Learning for Time Series Classification


An efficient browser extension to block browser-based cryptocurrency miners all over the web.


A deep learning-based tool to identify splice variants


aw_nas: A Modularized and Extensible NAS Framework


A Java library for Paillier partially homomorphic encryption.


Normalization for single cell RNA-seq data


TrojanZoo provides a universal pytorch platform to conduct security researches (especially backdoor attacks/defenses) of image classification in deep learning.


A GPU-accelerated TSDF and ESDF library for robots equipped with RGB-D cameras.


Solve automatic numerical differentiation problems in one or more variables.


A Comparative Framework for Multimodal Recommender Systems


ConvLab-2: An Open-Source Toolkit for Building, Evaluating, and Diagnosing Dialogue Systems


Main Sigma Rule Repository


Datasets, tools, and benchmarks for representation learning of code.


Apache Commons IO


Genomic data integration platform


CVPR 2022


PyTorch implementation of DeepLabv3


Implementation for Learning to Track with Object Permanence


Official code for the NeurIPS 2022 paper "Shape, Light, and Material Decomposition from Images using Monte Carlo Rendering and Denoising".


Anomaly Detection via Reverse Distillation from One-Class Embedding


Scenario analysis notebooks for the IPCC Special Report on Global Warming of 1.5°C


[ECCV 2020] PyTorch Implementation of some RGBD Semantic Segmentation models.


MoreFusion: Multi-object Reasoning for 6D Pose Estimation from Volumetric Fusion, CVPR 2020


EquiDock: geometric deep learning for fast rigid 3D protein-protein docking


Code for the CVPR 2020 [ORAL] paper "SAM: The Sensitivity of Attribution Methods to Hyperparameters"


Self-supervised Equivariant Attention Mechanism for Weakly Supervised Semantic Segmentation, CVPR 2020 (Oral)


a versatile and flexible pipeline for analysing different variants of ChIA-PET data


scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks


Code for CEDR: Contextualized Embeddings for Document Ranking, accepted at SIGIR 2019.


Transformer-based image captioning extension for pytorch/fairseq


Implementation of the DeepVesselNet deep learning network


A PyTorch implementation of ACM SIGKDD 2019 paper "Predicting Dynamic Embedding Trajectory in Temporal Interaction Networks"


A PyTorch implementation of "Robust Universal Neural Vocoding"


Implementation of the HotStuff consensus protocol.


Code for Biterm Topic Model (published in WWW 2013)


S2ORC: The Semantic Scholar Open Research Corpus:  https://www.aclweb.org/anthology/2020.acl-main.447/


Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.


Dictionary based sentiment analysis that considers valence shifters


Quality control for MinION sequencing data


Squeeze-and-Excitation Networks


Creative Commons Attribution Share Alike 4.0 International

Repository for Kuzushiji-MNIST, Kuzushiji-49, and Kuzushiji-Kanji


Implementation for the paper "Compositional Attention Networks for Machine Reasoning" (Hudson and Manning, ICLR 2018)


Official implementation of the TabPFN paper (https://arxiv.org/abs/2207.01848) and the tabpfn package.


R-package for structural equation modeling based on GWAS summary data


Multiple Automatically Generated Templates brain segmentation algorithm


Python libraries for DELPH-IN


New generation entropy codecs : Finite State Entropy and Huff0


Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2


PyBullet CartPole and Quadrotor environments—with CasADi symbolic a priori dynamics—for learning-based control and RL


A micro-service reference test application for model extraction, cloud management, energy efficiency, power prediction, single- and multi-tier auto-scaling


A fresh approach to string manipulation in R


ZMap is a fast single packet network scanner designed for Internet-wide network surveys.


UCSC command line bioinformatic utilities


Implementation of 'Blind Super-Resolution With Iterative Kernel Correction' (CVPR2019)


Referring Expression Datasets API


Audio-Visual Speech Separation with Cross-Modal Consistency


Code for the paper: CNN-generated images are surprisingly easy to spot... for now https://peterwang512.github.io/CNNDetection/


Massively parallel phylogenetic placement of genetic sequences


Environmental data for Antarctic and Southern Ocean science


Pytorch implementation of β-VAE


HRLDAS (High Resolution Land Data Assimilation System) containing the Noah-MP Land Surface Model


AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.


An awesome PyTorch NeRF library


Simple Text-Generator with OpenAI gpt-2 Pytorch Implementation


Ultra-fast de novo assembler using long noisy reads


Fastest network node embeddings in the west


Species occurrence data toolkit for R


HPXML to Home Energy Score Translator


Fast Gaussian-process inference using Vecchia approximations


Elegant and Easy Tweet Preprocessing in Python


PyTorch implementation of SLAYER for training Spiking Neural Networks


A library for debugging/inspecting machine learning classifiers and explaining their predictions


The Catalogue of Life


A Deep Learning UCI-Chess Variant Engine written in C++ & Python :parrot:


Higgs JavaScript Virtual Machine


R package implementation of Milo for testing for differential abundance in KNN graphs


This is a collection of our NAS and Vision Transformer work.


FMI.jl is a free-to-use software library for the Julia programming language which integrates FMI (fmi-standard.org): load or create, parameterize, differentiate and simulate FMUs seamlessly inside the Julia programming language!


Code for the TCAV ML interpretability project


Credentials catching honeypot


Python routines for calculations and data on the Intergalactic Medium


Official data on the COVID-19 epidemic in Malaysia. Powered by CPRC, CPRC Hospital System, MKAK, and MySejahtera.


SPLASH is an interactive visualisation and plotting tool using kernel interpolation, mainly used for Smoothed Particle Hydrodynamics simulations


De novo assembler for single molecule sequencing reads using repeat graphs


Open-source library for analyzing the results produced by ABINIT


An open-source Python package for designing and performing research on AguaClara water treatment plants.


Video-LLaVA: Learning United Visual Representation by Alignment Before Projection


KAIST Multispectral Pedestrian Detection Benchmark [CVPR '15]


PyTorch pre-trained model for real-time interest point detection, description, and sparse tracking (https://arxiv.org/abs/1712.07629)


⚠[Deprecated] no longer maintained, please use the code in https://github.com/guoshnBJTU/ASTGCN-r-pytorch


PyTorch Implementation of the paper Learning to Reweight Examples for Robust Deep Learning


Narwhal and Tusk: A DAG-based Mempool and Efficient BFT Consensus.


Python code for paper - Variational Deep Embedding : A Generative Approach to Clustering


Bi-Real Net: Enhancing the Performance of 1-bit CNNs With Improved Representational Capability and Advanced Training Algorithm. In ECCV 2018 and IJCV


DeepSleepNet: a Model for Automatic Sleep Stage Scoring based on Raw Single-Channel EEG


The released code of Neurify in NIPS 2018


Code for the ICLR 2023 paper "GPTQ: Accurate Post-training Quantization of Generative Pretrained Transformers".


:books: R interface to the Bio-Formats library


Code for the paper "Meta-Learning Shared Hierarchies"


Public release of TauREx3


Comically fast Dota 2, CSGO and CS2 replay parser written in Java.


The Eldarica model checker


Measurement methodology for advertising emissions


A Python library to capture the energy consumption of code snippets


Knowledge Computing group - MSRA


GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click the first link to launch: https://achtman-lab.github.io/GrapeTree/MSTree_holder.html


RAW image processing for Python, a wrapper for libraw


A Python wrapper for the high-quality vocoder "World"


Julia implementation of unsupervised learning methods for time series datasets. It provides functionality for clustering and aggregating, detecting motifs, and quantifying similarity between time series datasets.


ThreeDWorld simulation environment


Virtual Knowledge Graph Creation from RDB with R2RML


This is an open-source implementation of the ITU P.808 standard for "Subjective evaluation of speech quality with a crowdsourcing approach" (see https://www.itu.int/rec/T-REC-P.808/en). It uses Amazon Mechanical Turk as the crowdsourcing platform. It includes implementations for Absolute Category Rating (ACR), Degradation Category Rating (DCR), and Comparison Category Rating (CCR).


The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory.


Attempt at tracking states of the arts and recent results (bibliography) on speech recognition.


Simple multirotor simulator with MAVLink protocol support


SOTA Re-identification Methods and Toolbox


Python support for the Transactive Energy Simulation Platform


DPDK based packet generator


Various algorithms for analysing genomics data


Repository of yara rules


PyTorch Implementation of DiffGAN-TTS: High-Fidelity and Efficient Text-to-Speech with Denoising Diffusion GANs


Source code for paper: Improving Grammatical Error Correction via Pre-Training a Copy-Augmented Architecture with Unlabeled Data


Code for IEEE Communication Magazine (A Survey on Behaviour Recognition Using WiFi Channle State Information)


Schema for modelling parliamentary debates


flexible barcode and adapter removal


Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.


Invariant Information Clustering for Unsupervised Image Classification and Segmentation


The authors official implementation of Unsupervised Discovery of Interpretable Directions in the GAN Latent Space


A tensorflow implementation of GraphGAN (Graph Representation Learning with Generative Adversarial Nets)


[ICCV 2019] Monocular depth estimation from a single image


Raw nanopore signal mapper that enables real-time targeted sequencing


A pipeline for running AMRfinderPlus and collating results into functional classes


This is the documentation repository for ongoing releases to the NDA collection 3165.  Please add GitHub Issues here for requests or feedback.


A Python toolkit for running and coupling Earth surface models


Scanomatic


Tensorflow + Molecules = TensorMol


Procgen Benchmark: Procedurally-Generated Game-Like Gym-Environments


rFIA


中文LLaMA-2 & Alpaca-2大模型二期项目 + 64K超长上下文模型 (Chinese LLaMA-2 & Alpaca-2 LLMs with 64K long context models)


Tevatron - A flexible toolkit for neural retrieval research and development.


Automated, hardware-independent Hand-Eye Calibration


UniSpeech  - Large Scale Self-Supervised Learning for Speech


[DEPRECATED] Security Scanner for Ethereum Smart Contracts


B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction


A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.


WPS services related to hydrological modeling


Cytometry dATa anALYsis Tools


The Dispa-SET unit-commitment and optimal dispatch model, developed at the JRC


Jupyter-friendly Python interface for C++ MINUIT2


Blue Brain Python Optimisation Library


Official repository of the AWS EC2 FPGA Hardware and Software Development Kit


PaddleScience is SDK and library for developing AI-driven scientific computing applications based on PaddlePaddle.


PyMuPDF is a high performance Python library for data extraction, analysis, conversion & manipulation of PDF (and other) documents.


E-mails, subdomains and names Harvester - OSINT


Arm NN ML Software. The code here is a read-only mirror of https://review.mlplatform.org/admin/repos/ml/armnn


A PyTorch implementation of the Deep SVDD anomaly detection method


Keras-based implementation of Relational Graph Convolutional Networks


End-to-End Neural Diarization


SPP_net : Spatial Pyramid Pooling in Deep Convolutional Networks for Visual Recognition


Official Implementation of the Paper "Capsules for Object Segmentation".


Code for the ICASSP 2022 paper "Transformer-Based Multi-Aspect Multi-Granularity Non-native English Speaker Pronunciation Assessment".


Series of work (ECCV2020, CVPR2021, CVPR2021, ECCV2022) about Compositional Learning for Human-Object Interaction Exploration


YourTTS: Towards Zero-Shot Multi-Speaker TTS and Zero-Shot Voice Conversion for everyone


Social Ways: Learning Multi-Modal Distributions of Pedestrian Trajectories with GANs (CVPR 2019)


Object detection with multi-level representations generated from deep high-resolution representation learning (HRNetV2h). This is an official implementation for our TPAMI paper "Deep High-Resolution Representation Learning for Visual Recognition". https://arxiv.org/abs/1908.07919


[CVPR2020] BiFuse: Monocular 360 Depth Estimation via Bi-Projection Fusion


:microscope: BEDOPS: high-performance genomic feature operations


UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association analyses.


Reinforcement learning algorithms for MuJoCo tasks


Simple and extensible GAN image-to-image translation framework. Supports natural and medical images.


An Open Source Tools for Speaker Recognition


This is a collection of our zero-cost NAS and efficient vision applications.


Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework


ATOM3D: tasks on molecules in three dimensions


Inference of ploidy and heterozygosity structure using whole genome sequencing data


BSR-Based Allele Calling Algorithm


:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset


A research-friendly codebase for fast experimentation of multi-agent reinforcement learning in JAX


An open-source multi-purpose N-body code.


Implementation of the CheXNet network (PyTorch)


ICCV2021, Tokens-to-Token ViT: Training Vision Transformers from Scratch on ImageNet


Work in progress transmit from Google Code


Code for ICLR 2020 paper "VL-BERT: Pre-training of Generic Visual-Linguistic Representations".


graph wavenet


SCAN: Learning to Classify Images without Labels, incl. SimCLR. [ECCV 2020]


Automated dense category annotation engine that serves as the initial semantic labeling for the Segment Anything dataset (SA-1B).


Metapackage for brightway2 imports and documentation


Score-based Generative Models (Diffusion Models) for Speech Enhancement and Dereverberation


R package to conduct univariate and bivariate wavelet analyses


VideoX: a collection of video cross-modal models


Neural model for converting Image-to-Markup (by Yuntian Deng yuntiandeng.com)


:atom_symbol: Qiskit (Quantum Information Science Kit) for JavaScript


CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.


Trained model files for dlib example programs.


iCount, protein-RNA interaction analytics


diploid SNV caller for error-prone reads


Fast hyperparameter settings for non-smooth estimators:


BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data


Logical manifestations of topological concepts, and other things, via the univalent point of view.


RISC-V Configuration Validator


A generic track-fitting toolkit


Julia package for tensor contractions and related operations


Earthdata Search is a web application developed by NASA EOSDIS to enable data discovery, search, comparison, visualization, and access across EOSDIS' Earth Science data holdings.


⟁ Tendermint Core (BFT Consensus) in Go


Apache Tomcat


[CVPR 2022] StyleGAN-V: A Continuous Video Generator with the Price, Image Quality and Perks of StyleGAN2


SOTA Semantic Segmentation Models in PyTorch


[CVPR2022] Geometric Transformer for Fast and Robust Point Cloud Registration


structural analysis of neonatal brain MRI scans


Official PyTorch implementation of "Camera Distance-aware Top-down Approach for 3D Multi-person Pose Estimation from a Single RGB Image", ICCV 2019


ArcFace unofficial Implemented in Tensorflow 2.0+ (ResNet50, MobileNetV2). "ArcFace: Additive Angular Margin Loss for Deep Face Recognition" Published in CVPR 2019. With Colab.


R package for pre-processing of mass and flow cytometry data


Benchmarks for popular CNN models


A Python wrapper for the ROUGE summarization evaluation package


Extended Isolation Forest for Anomaly Detection


A Graph Traversal Language (no longer active - see Apache TinkerPop)


ALFRED - A Benchmark for Interpreting Grounded Instructions for Everyday Tasks


Extreme weather detection and characterization


A Python library that encapsulates various methods for neuron interpretation and analysis in Deep NLP models.


Transfer Learning Library


A high-performance Java Implementation of RDF2Vec


Source code of FUMA GWAS web application


3D mesh stylization driven by a text input in PyTorch


CLIP-like model evaluation


fastPM - A N-body Particle Mesh solver that scales


A neat code differencing tool


ASTER in Pytorch


This repository is meant to host a beta version for the future release of the ConnectomeMapper.


Visualize Arctic and Antarctic sea ice


Pytorch implementation of CRNN (CNN + RNN + CTCLoss) for all language OCR.


Ground-Water Hydrograph Analysis Toolbox


CNS (Computational Neuroscience) Lab project for age/sex classification of fMRI scans


Fast & scalable Gaussian Processes in one dimension


Python package for dealing with the Halo Model


SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer samples. Supports both bam and cram format via htslib


Python workflow for DP5 and DP4 analysis of organic molecules


An annotated implementation of the Transformer paper.


The PyTorch implementation of LightGCN


Library for Bayesian inference via sequential Monte Carlo for quantum parameter estimation.


Evaluation code for various unsupervised automated metrics for Natural Language Generation.


Violin Plots for Matlab


PHAST


Fast solver for L1-type problems: Lasso, sparse Logisitic regression, Group Lasso, weighted Lasso, Multitask Lasso, etc.


LOFAR pipeline using killms/ddfacet


PASSL包含 SimCLR，MoCo v1/v2，BYOL，CLIP，PixPro，simsiam, SwAV, BEiT，MAE   等图像自监督算法以及 Vision Transformer，DEiT，Swin Transformer，CvT，T2T-ViT，MLP-Mixer，XCiT，ConvNeXt，PVTv2 等基础视觉算法


Automatic metrics for GEM tasks


Tool for the Quality Control of Long-Read Defined Transcriptomes


:dragon: Compute and work with indices of effect size and standardized parameters


OpenJij  : Framework for the Ising model and QUBO.


Software synthesizer based on the SoundFont 2 specifications


Code for 'Leveraging the Feature Distribution in Transfer-based Few-Shot Learning'


AI Super - Resolution


official code repo for paper "CogView2: Faster and Better Text-to-Image Generation via Hierarchical Transformers"


Empirical wave runup models implemented in Python


An official implementation for "CLIP4Clip: An Empirical Study of CLIP for End to End Video Clip Retrieval"


A power station dictionary that enables mapping between various naming conventions and associated plant metadata


See how much of your cloud bill is spent on fossil fuels ,so you can do the right thing and switch. We're in a climate crisis, remember?


Fast cosmological perturbation theory


Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans


Scikit-learn style model finetuning for NLP


Reverb is an efficient and easy-to-use data storage and transport system designed for machine learning research


Starter code for working with the YouTube-8M dataset.


Elastic Deep Learning for deep learning framework on Kubernetes


Mobile vision models and code


Segmentation models with pretrained backbones. PyTorch.


SonarQube C++ Community plugin (cxx plugin): This plugin adds C++ support to SonarQube with the focus on integration of existing C++ tools.


Redis adapted to use Persistent Memory


Tools to make an R developer's life easier


3.8% and 18.3% on CIFAR-10 and CIFAR-100


Weakly Supervised Learning of Instance Segmentation with Inter-pixel Relations, CVPR 2019 (Oral)


improves over nerf in 360 capture of unbounded scenes


MaskFusion: Real-Time Recognition, Tracking and Reconstruction of Multiple Moving Objects


The Cannon 2: Compressed sensing edition


Just playing with getting VQGAN+CLIP running locally, rather than having to use colab.


qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.


Torch-7 for Android


Short Read Sequence Typing for Bacterial Pathogens


Codebase for "SLIDE : In Defense of Smart Algorithms over Hardware Acceleration for Large-Scale Deep Learning Systems"


An ontology of core ecological entities


Code for "High-Precision Model-Agnostic Explanations" paper


A simple and highly efficient RTS-game-inspired environment for reinforcement learning (formerly Gym-MicroRTS)


A library for federated learning (a distributed machine learning process) in an enterprise environment.


Source code of openLCA


KaHyPar (Karlsruhe Hypergraph Partitioning) is a multilevel hypergraph partitioning framework providing direct k-way and recursive bisection based partitioning algorithms that compute solutions of very high quality.


BERT score for text generation


A Python Matplotlib, Numpy library to manage wind data, draw windrose (also known as a polar rose plot), draw probability density function and fit Weibull distribution


An Open-Source Package for Textual Adversarial Attack.


The mrremind packages contains data preprocessing for the REMIND model.


NASBench: A Neural Architecture Search Dataset and Benchmark


Density-aware Single Image De-raining using a Multi-stream Dense Network  (CVPR 2018)


[ECCV 2020] "Contrastive Multiview Coding", also contains implementations for MoCo and InstDis


BLLIP reranking parser (also known as Charniak-Johnson parser, Charniak parser, Brown reranking parser) See http://pypi.python.org/pypi/bllipparser/ for Python module.


GLIDE: a diffusion-based text-conditional image synthesis model


LaneNet implementation in PyTorch


This repository contains source code for the TaBERT model, a pre-trained language model for learning joint representations of natural language utterances and (semi-)structured tables for semantic parsing. TaBERT is pre-trained on a massive corpus of 26M Web tables and their associated natural language context, and could be used as a drop-in replacement of a semantic parsers original encoder to compute representations for utterances and table schemas (columns).


Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data


An implementation of the TrueSkill rating system for Python


Image Inpainting via Generative Multi-column Convolutional Neural Networks, NeurIPS2018


Code for visualizing the loss landscape of neural nets


TableBank: A Benchmark Dataset for Table Detection and Recognition


How to predict extreme events in climate using rare event algorithms and modern tools of machine learning


PHYRE is a benchmark for physical reasoning.


OpenAQ API


This library provides common speech features for ASR including MFCCs and filterbank energies.


Efficient target prediction incorporating accessibility of interaction sites


A semidefinite program solver for the conformal bootstrap.


An open-source neural machine translation toolkit developed by Tsinghua Natural Language Processing Group


Fast and efficient ed25519 signing and verification in Rust.


使用深度学习方法解析问题 知识图谱存储 查询知识点 基于医疗垂直领域的对话系统


A toolbox for improving metagenome-assembled genomes.


Code for "MixMatch - A Holistic Approach to Semi-Supervised Learning"


The original code for the paper "How to train your MAML" along with a replication of the original "Model Agnostic Meta Learning" (MAML) paper in Pytorch.


Python library for multilinear algebra and tensor factorizations


MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III


Improving XGBoost survival analysis with embeddings and debiased estimators


A trajectory optimization library for Matlab


ATAC-seq and DNase-seq processing pipeline


Structured state space sequence models


The Bitcoin Fungibility Framework


DeepTables:  Deep-learning Toolkit for Tabular data


PyForecast is a statistical modeling tool used by Reclamation water managers and reservoir operators to train and build predictive models for seasonal inflows and streamflows. PyForecast allows users to make current water-year forecasts using models developed with the program.


Deep GPs built on top of TensorFlow/Keras and GPflow


HIPIFY: Convert CUDA to Portable C++ Code


The Community Earth System Model


NoSQL Redis and Memcache traffic generation and benchmarking tool.


LSD-SLAM


Point cloud diffusion for 3D model synthesis


Junction Tree Variational Autoencoder for Molecular Graph Generation (ICML 2018)


TensorFlow Code for paper "Efficient Neural Architecture Search via Parameter Sharing"


Firefly(流萤): 中文对话式大语言模型(全量微调+QLoRA)，支持微调Mixtral-8x7B、Zephyr、Mistral、Aquila2、Baichuan2、CodeLlama、Llma2、Llama、Qwen、Baichuan、ChatGLM2、InternLM、Ziya、Bloom等大模型


Official PyTorch code for "BAM: Bottleneck Attention Module (BMVC2018)" and "CBAM: Convolutional Block Attention Module (ECCV2018)"


Real-World Masked Face Dataset，口罩人脸数据集


This is a language detection library implemented in plain Java. (aliases: language identification, language guessing)


This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021.  2) TransBTSV2: Towards Better and More Efficient Volumetric Segmentation of Medical Images(https://arxiv.org/abs/2201.12785).


The Pytorch implementation for "Semantic Graph Convolutional Networks for 3D Human Pose Regression" (CVPR 2019).


Modern HTTP benchmarking tool


Fast, modular reference implementation and easy training of Semantic Segmentation algorithms in PyTorch.


Advanced implementation of LOAM


Grammars written for ANTLR v4; expectation that the grammars are free of actions.


Official PyTorch implementation of U-GAT-IT: Unsupervised Generative Attentional Networks with Adaptive Layer-Instance Normalization for Image-to-Image Translation


source code to ICLR'19, 'A Closer Look at Few-shot Classification'


Implementation of our paper 'PixelLink: Detecting Scene Text via Instance Segmentation' in AAAI2018


FewX is an open-source toolbox on top of Detectron2 for data-limited instance-level recognition tasks.


Simple and Efficient Tensorflow implementations of NER models with tf.estimator and tf.data


This is a dataset for fake news detection research


主流ocr算法研究实验性的项目，目前实现了CNN+BLSTM+CTC架构


VizNet is a repository providing real-world datasets that enable, among other things, (re)running empirical studies with higher ecological validity


A clean PyTorch implementation of SiamFC tracking/training, evaluated on 7 datasets.


Caffe Implementation of Google's MobileNets (v1 and v2)


single cell Flux Estimation Analysis (scFEA) Try the below web server!


Code release for "Convolutional Two-Stream Network Fusion for Video Action Recognition", CVPR 2016.


Single Image Crowd Counting via MCNN (Unofficial Implementation)


MAIAN: automatic tool for finding trace vulnerabilities in Ethereum smart contracts


CNNs for sentence classification


Convolutional neural network model for video classification trained on the Kinetics dataset.


Practice on cifar100(ResNet, DenseNet, VGG, GoogleNet, InceptionV3, InceptionV4, Inception-ResNetv2, Xception, Resnet In Resnet, ResNext,ShuffleNet, ShuffleNetv2, MobileNet, MobileNetv2, SqueezeNet, NasNet, Residual Attention Network, SENet, WideResNet)


Official implementation of "VoxelPose: Towards Multi-Camera 3D Human Pose Estimation in Wild Environment"


Pytorch reimplementation of the Vision Transformer (An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale)


image scene graph generation benchmark


Code for https://arxiv.org/abs/1611.10080


Physics Informed Deep Learning: Data-driven Solutions and Discovery of Nonlinear Partial Differential Equations


Code for Neural Motifs: Scene Graph Parsing with Global Context (CVPR 2018)


MIRACL Cryptographic SDK: Multiprecision Integer and Rational Arithmetic Cryptographic Library is a C software library that is widely regarded by developers as the gold standard open source SDK for elliptic curve cryptography (ECC).


Tools for fast and flexible genome assembly scaffolding and improvement


Synthetic Minority Over-Sampling Technique for Regression


A simple baseline for 3d human pose estimation in tensorflow. Presented at ICCV 17.


Neural Graph Collaborative Filtering, SIGIR2019


2nd solution of ICDAR 2021 Competition on Scientific Literature Parsing, Task B.


MDNet PyTorch implementation


BERT for Coreference Resolution


[SIGGRAPH'22] StyleGAN-XL: Scaling StyleGAN to Large Diverse Datasets


RoBERTa中文预训练模型: RoBERTa for Chinese


adapter trimmer for Oxford Nanopore reads


The code of "Mask TextSpotter v3: Segmentation Proposal Network for Robust Scene Text Spotting"


R-FCN: Object Detection via Region-based Fully Convolutional Networks


Visualizer for neural network, deep learning and machine learning models


code for ACL 2020 paper: FLAT: Chinese NER Using Flat-Lattice Transformer


Implementation code for the paper "Graph Neural Network-Based Anomaly Detection in Multivariate Time Series" (AAAI 2021)


Discover augmentation strategies tailored for your dataset


HiFi-GAN: Generative Adversarial Networks for Efficient and High Fidelity Speech Synthesis


:id: Scan contig files against PubMLST typing schemes


Official implementation of "Implicit Neural Representations with Periodic Activation Functions"


The solution of team 'grt123' in DSB2017


Simple, online, and realtime tracking of multiple objects in a video sequence.


Code for generating synthetic text images as described in "Synthetic Data for Text Localisation in Natural Images", Ankush Gupta, Andrea Vedaldi, Andrew Zisserman, CVPR 2016.


A Kitti Road Segmentation model implemented in tensorflow.


Download Datasets and Ground Truths:  https://github.com/TuSimple/tusimple-benchmark/issues/3


Source code about machine learning and security.


NeuSpell: A Neural Spelling Correction Toolkit


RISC-V processor emulator written in Rust+WASM


This is the official code for the paper CodeRL: Mastering Code Generation through Pretrained Models and Deep Reinforcement Learning (NeurIPS22).


DIA-NN - a universal automated software suite for DIA proteomics data analysis.


这是一个YoloV4-pytorch的源码，可以用于训练自己的模型。


Real-time pose estimation accelerated with NVIDIA TensorRT


Fast and accurate de novo assembler for long reads


SimCLRv2 - Big Self-Supervised Models are Strong Semi-Supervised Learners


neural question generation for reading comprehension


Learning diverse image-to-image translation from unpaired data


Instant-ngp in pytorch+cuda trained with pytorch-lightning (high quality with high speed, with only few lines of legible code)


Multimodal Unsupervised Image-to-Image Translation


Neural network visualization toolkit for tf.keras


A prototype of soft contract verification for an untyped functional language


The official repo for [NeurIPS'22] "ViTPose: Simple Vision Transformer Baselines for Human Pose Estimation" and [TPAMI'23] "ViTPose++: Vision Transformer for Generic Body Pose Estimation"


Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch


Deepdrive is a simulator that allows anyone with a PC to push the state-of-the-art in self-driving


Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species


A preprocessing and QC pipeline for HiChIP data


The primary source code repository for PHCpack, a software package to solve polynomial systems with homotopy continuation methods.


Simple, fast unsupervised word aligner


Deep learning face detection and recognition, implemented by pytorch. (pytorch实现的人脸检测和人脸识别)


Training and Detecting Objects with YOLO3


Landmark-based audio fingerprinting


The state-of-the-art image restoration model without nonlinear activation functions.


Poisson Surface Reconstruction


Ranked vaccine peptides for personalized cancer immunotherapy


Retinaface get 80.99% in widerface hard val using mobilenet0.25.


UCCA Documentation


Html Content / Article Extractor, web scrapping lib in Python


3D Bounding Box Annotation Tool (3D-BAT) Point cloud and Image Labeling


Deep Residual Learning for Image Recognition


Baidu's open-source Sentiment Analysis System.


Classification with PyTorch.


Neural question generation using transformers


A plugin for GTAV that transforms it into a vision-based self-driving car research environment.


Grounded Language-Image Pre-training


Automatically exported from code.google.com/p/cdhit


High-performance Terrain and Hydrology Analysis


Python botnet and backdoor


PyTorch implementation of "FullSubNet: A Full-Band and Sub-Band Fusion Model for Real-Time Single-Channel Speech Enhancement."


a molecular descriptor calculator


ELECTRA: Pre-training Text Encoders as Discriminators Rather Than Generators


Fast, integrative fine mapping with functional data


A torch implementation of http://arxiv.org/abs/1511.06434


Tensorflow implementation of contextualized word representations from bi-directional language models


Protégé plugin for creating OWL ontologies from spreadsheets


TRI-ML Monocular Depth Estimation Repository


DEPRECATED: Check out PyKOSMOS!


Population-scale genotyping using pangenome graphs


Google AI 2018 BERT pytorch implementation


Tools for accessing the Botanical Information and Ecology Network (BIEN) database


pkuseg多领域中文分词工具; The pkuseg toolkit for multi-domain Chinese word segmentation


This  is a  Experimental version of OpenCL by AMD Research, we now recommend you to use The official BVLC Caffe OpenCL branch is over at Caffe branch now at https://github.com/BVLC/caffe/tree/opencl


Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)


Sparse InversE Covariance estimation for Ecological Association and Statistical Inference


Show, Attend, and Tell | a PyTorch Tutorial to Image Captioning


[IEEE TMI] Official Implementation for UNet++


A versatile simulation and optimization platform for power-system planning and operations.


Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking


Neural Surface reconstruction based on Instant-NGP. Efficient and customizable boilerplate for your research projects. Train NeuS in 10min!


A scalable high-throughput metabolic and biogeochemical functional trait profiler


:fire::fire: PyTorch implementation of "Progressive growing of GANs (PGGAN)" :fire::fire:


AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and elucidates the architecture of the amplicon.   In the current version, AA takes as input next generation sequencing reads (paired-end Illumina reads) mapped to the hg19/GRCh37 reference sequence and one or more regions of interest. Please "watch" this repository for improvements in runtime, accuracy and annotations for GRCh38 human reference genome coming up soon.


Core data gathering, validation, processing, and reporting package for the Solar Forecast Arbiter


Duke is a fast and flexible deduplication engine written in Java


Semantic Segmentation on PyTorch (include FCN, PSPNet, Deeplabv3, Deeplabv3+, DANet, DenseASPP, BiSeNet, EncNet, DUNet, ICNet, ENet, OCNet, CCNet, PSANet, CGNet, ESPNet, LEDNet, DFANet)


Multi-subject Single Cell Deconvolution


Fast HLA type inference from whole-genome data


PWC-Net: CNNs for Optical Flow Using Pyramid, Warping, and Cost Volume, CVPR 2018 (Oral)


A Squeak/Smalltalk-based programming environment and framework that supports low-effort construction of graphical tools by employing a data-driven perspective and a script-based programming model.


Scala 2 bug reports only. Please, no questions — proper bug reports only.


Deep count autoencoder for denoising scRNA-seq data


SNIPER / AutoFocus is an efficient multi-scale object detection training / inference algorithm


Declarative, On-Device Machine Learning for iOS, Android, and React Native. Deploy. Predict. Train.


This repository contains the source code for the semantic image segmentation method described in the ICCV 2015 paper: Conditional Random Fields as Recurrent Neural Networks. http://crfasrnn.torr.vision/


Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.


RAxML Next Generation: faster, easier-to-use and more flexible


MLBox is a powerful Automated Machine Learning python library.


Convolutional Neural Networks to predict the aesthetic and technical quality of images.


A Bulletproof Way to Generate Structured JSON from Language Models


Convolutional recurrent network in pytorch


Official code base of the BEVDet series .


GUI for marking bounded boxes of objects in images for training neural network Yolo v3 and v2


PyTorch implementation of the NIPS-17 paper "Poincaré Embeddings for Learning Hierarchical Representations"


Coq is a formal proof management system. It provides a formal language to write mathematical definitions, executable algorithms and theorems together with an environment for semi-interactive development of machine-checked proofs.


RoutingKit is a C++ library that provides advanced route planning functionality.


OpenChat: Advancing Open-source Language Models with Imperfect Data


A PyTorch toolkit for 2D Human Pose Estimation.


Temporal Relation Networks


A bioinformatics pipeline to analyze mtDNA from NGS data


PyTorch code and models for the DINOv2 self-supervised learning method.


Open source remote sensing dataset with benchmarks


Structural variation caller using third generation sequencing


R Wrapper for Tetrad Library


:postbox: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study


Pretrained DeepLabv3 and DeepLabv3+ for Pascal VOC & Cityscapes


PyTorch version of the paper 'Enhanced Deep Residual Networks for Single Image Super-Resolution' (CVPRW 2017)


[CVPR 2023] Official implementation of the paper "Mask DINO: Towards A Unified Transformer-based Framework for Object Detection and Segmentation"


Tools test whether admixture occurred and more


The X Toolkit


streamMetabolizer uses inverse modeling to estimate aquatic metabolism (photosynthesis and respiration) from time series data on dissolved oxygen, water temperature, depth, and light.


Anomaly Detection and Correlation library


Keras implementation of a CNN network for age and gender estimation


A project written in Python to get old tweets, it bypass some limitations of Twitter Official API.


A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.


Repo for reproduction of sequential social dilemmas


Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph


Line Modeling Engine


EOSIO Documents


Unofficial pytorch implementation for Self-critical Sequence Training for Image Captioning. and others.


Longformer: The Long-Document Transformer


The ApolloScape Open Dataset for Autonomous Driving and its Application.


Open-Source Large Vocabulary Continuous Speech Recognition Engine


a distributed Hyperband implementation on Steroids


KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files


Laplace approximations for Deep Learning.


Bag of Tricks and A Strong Baseline for Deep Person Re-identification


High-Performance Face Recognition Library on PaddlePaddle & PyTorch


Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:


Performance-portable geometric search library


[NeurIPS 2023] Official implementation of the paper "Segment Everything Everywhere All at Once"


PTPd official source - master branch a.k.a. trunk


Leaf: A Benchmark for Federated Settings


A pure JavaScript medical research image viewer.


MELT - Matching EvaLuation Toolkit


RSEM: accurate quantification of gene and isoform expression from RNA-Seq data


ENCODE ATAC-seq pipeline


Synthesizing and manipulating 2048x1024 images with conditional GANs


High-level library to help with training and evaluating neural networks in PyTorch flexibly and transparently.


An extension of xarray for climate data analysis on structured grids.


A CV toolkit for my papers.


A data utility for tracking climate action


Fuzzy String Matching in Python


High quality, fast, modular reference implementation of SSD in PyTorch


Decoder, aligner, and model optimizer for statistical machine translation and other structured prediction models based on (mostly) context-free formalisms


Version 2 of the minc-toolkit, uses tools based on ITK version 4.x


[ICLR 2020] Once for All: Train One Network and Specialize it for Efficient Deployment


Models and optimizes capacity & dispatch of electricity supply systems, off-grid or connected to a (weak) central grid


Deep Learning in Javascript. Train Convolutional Neural Networks (or ordinary ones) in your browser.


Library for multivariate function approximation with splines (B-spline, P-spline, and more) with interfaces to C++, C, Python and MATLAB


MicaSense RedEdge and Altum image processing tutorials


Evolutionary algorithm toolbox and framework with high performance for Python


A Strong and Easy-to-use Single View 3D Hand+Body Pose Estimator


GNU Radio blocks for receiving LoRa modulated radio messages using SDR


Spearmint Bayesian optimization codebase


ADDA - light scattering simulator based on the discrete dipole approximation


The repository containing tools and information about the WoodScape dataset.


FAst Lookups of Cosine and Other Nearest Neighbors (based on fast locality-sensitive hashing)


Climate from Space application for ESA's CCI+ program.


An implementation of CycleGan using TensorFlow


Woltka: a versatile meta'omic data classifier


Large-scale open domain KNOwledge grounded conVERsation system based on PaddlePaddle


Particle-resolved stochastic atmospheric aerosol model


Reading Wikipedia to Answer Open-Domain Questions


Full public release of large scale and linear scaling DFT code CONQUEST


A Robust and Versatile Monocular Visual-Inertial State Estimator


viral-ngs: complete pipelines


Generate text images for training deep learning ocr model


Efficient, reusable RNNs and LSTMs for torch


TimerOne Library with optimization and expanded hardware support


DeepWalk - Deep Learning for Graphs


A Python 3 Bitcoin blockchain parser


Convolutional Neural Networks


A transients-discovery pipeline for astronomical image-based surveys


Collection of hyperparameter optimization benchmark problems


MetaXcan software and manuscript


Arduino Cryptography Library


Praat: Doing Phonetics By Computer


Algorithms for Quantitative Pedology


Minotour API, web and client code


pvcompare is a model for comparing the benefits of different PV technologies in local energy systems in different energy supply scenarios.


SMPL-X


Open and Affordable Quantitative Imaging Platform


Latex code for making neural networks diagrams


software for UCE (and general) phylogenomics


just annotate it, dammit!


Pythonic stellar model grid access; easy MCMC fitting of stellar properties


Python suite to construct benchmark machine learning datasets from the MIMIC-III  clinical database.


IA's public Wayback Machine (moved from SourceForge)


Download numerical weather prediction datasets (HRRR, RAP, GFS, NAM, NBM, etc.) from NOMADS, NODD partners (Amazon, Google, Microsoft), ECMWF open data, and the University of Utah Pando Archive System.


python module to plot beautiful and highly customizable genome browser tracks


A PyTorch implementation of NeRF (Neural Radiance Fields) that reproduces the results.


FauxPilot - an open-source alternative to GitHub Copilot server


libcmaes is a multithreaded C++11 library with Python bindings for high performance blackbox stochastic optimization using the CMA-ES algorithm for Covariance Matrix Adaptation Evolution Strategy


Matlab/Octave based platform for Radiological Research.


A tool to quickly and easily create inputs for power systems models


An extensible framework for program autotuning


Open neural machine translation models and web services


Large scale graph learning on a single machine.


National Carbon Credit Registry Digital Public Good (DPG) by Digital For Climate (D4C) collaboration. Code coordinated by ExO/CDO & BPPS/Climate.


You can find the most recent KGQA benchmark numbers from publications here.


Espressif IoT Development Framework. Official development framework for Espressif SoCs.


Quickly build Explainable AI dashboards that show the inner workings of so-called "blackbox" machine learning models.


StudioGAN is a Pytorch library providing implementations of representative Generative Adversarial Networks (GANs) for conditional/unconditional image generation.


Semantic Segmentation Architectures Implemented in PyTorch


C++ API & command-line toolkit for working with BAM data


Otter, a multi-modal model based on OpenFlamingo (open-sourced version of DeepMind's Flamingo), trained on MIMIC-IT and showcasing improved instruction-following and in-context learning ability.


Optimize and assist planning your garden


The open source BIMserver platform


OPERA-MS - Hybrid Metagenomic Assembler


lumpy: a general probabilistic framework for structural variant discovery


Measures and metrics for image2image tasks. PyTorch.


TreeMapper extends the Plant-for-the-Planet Platform and allows on site data registration for restoration initiatives.


Interpretability Methods for tf.keras models with Tensorflow 2.x


Developed to power Conveyal's web-based interface for scenario planning and land-use/transport accessibility analysis, R5 is our routing engine for multimodal (transit/bike/walk/car) networks with a particular focus on public transit


Pretrained ConvNets for pytorch: NASNet, ResNeXt, ResNet, InceptionV4, InceptionResnetV2, Xception, DPN, etc.


A FHIR® Server with internal, fast CQL Evaluation Engine


Hierarchical Alignment Format


Learning embeddings for classification, retrieval and ranking.


Deep Learning toolkit for Computer Vision.


Toolkit for working with RADIANCE for the ray-trace modeling of Bifacial Photovoltaics


simona is an agent-based discrete-event power system simulation model developed @ie3-institute


High-Resolution Image Synthesis with Latent Diffusion Models


Cedille, a dependently typed programming languages based on the Calculus of Dependent Lambda Eliminations


Modeling of residential buildings in EnergyPlus using OpenStudio/HPXML.


OCTIS: Comparing Topic Models is Simple! A python package to optimize and evaluate topic models (accepted at EACL2021 demo track)


LD Score Regression (LDSC)


Installer for D-Wave's Ocean tools


Bringing large-language models and chat to web browsers. Everything runs inside the browser with no server support.


A verification tool for many memory models


Elegant parsing in Java and Scala - lightweight, easy-to-use, powerful.


C++ library for solving large sparse linear systems with algebraic multigrid method


YOLO ROS: Real-Time Object Detection for ROS


[CVPR 2023 Highlight] InternImage: Exploring Large-Scale Vision Foundation Models with Deformable Convolutions


The NCAR Command Language (NCL) is a scripting language for the analysis and visualization of climate and weather data.


Fast audio data augmentation in PyTorch. Inspired by audiomentations. Useful for deep learning.


ACHE is a web crawler for domain-specific search.


Differentiable ODE solvers with full GPU support and O(1)-memory backpropagation.


TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models


fastFM: A Library for Factorization Machines


Reinforcement Learning in PyTorch


Extensible specification for representing and uniquely identifying biological sequence variation


Species Presence/Absence R Trends Analyses


HiC-Pro: An optimized and flexible pipeline for Hi-C data processing


15MW reference wind turbine repository developed in conjunction with IEA Wind


Line based ATR Engine based on OCRopy


Python-based research interface for blackbox and hyperparameter optimization, based on the internal Google Vizier Service.


A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model.


Official repository for 21cmFAST: a code for generating fast simulations of the cosmological 21cm signal


Kriging Toolkit for Python


NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org


Python audio and music signal processing library


Library for Digital Pathology Image Processing


Transfer Learning Library for Domain Adaptation, Task Adaptation, and Domain Generalization


Brevitas: neural network quantization in PyTorch


brain connectivity toolbox for python


Language-Agnostic SEntence Representations


An open-source framework for training large multimodal models.


AutoDock Vina


H2O is an Open Source, Distributed, Fast & Scalable Machine Learning Platform: Deep Learning, Gradient Boosting (GBM) & XGBoost, Random Forest, Generalized Linear Modeling (GLM with Elastic Net), K-Means, PCA, Generalized Additive Models (GAM), RuleFit, Support Vector Machine (SVM), Stacked Ensembles, Automatic Machine Learning (AutoML), etc.


MISP (core software) - Open Source Threat Intelligence and Sharing Platform


VAPOR is the Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers


Julia interface for Reading from the Earth System Datacube


line drawing colorization using chainer


Quantus is an eXplainable AI toolkit for responsible evaluation of neural network explanations


Accelerated BLAST compatible local sequence aligner.


汉字转拼音(pypinyin)


R package for DNA methylation analysis


Eureka! is a data reduction and analysis pipeline intended for time-series observations with JWST.


Visualization and analysis software for Hi-C data -


Conditional GAN for generating synthetic tabular data.


TCGAbiolinks


Brain Modeling Toolkit


A Python library for phylogenetic scripting, simulation, data processing and manipulation.


The core library of differential privacy algorithms powering the OpenDP Project.


The Modular Ocean Model


A toolbox of OCR models, algorithms, and pipelines based on MindSpore


A Python Library for Self Organizing Map (SOM)


NanoDet-Plus⚡Super fast and lightweight anchor-free object detection model. Only 980 KB(int8) / 1.8MB (fp16) and run 97FPS on cellphone


A package for the sparse identification of nonlinear dynamical systems from data


⚡ Energy consumption metrology agent. Let "scaph" dive and bring back the metrics that will help you make your systems and applications more sustainable !


PySwip is a Python - SWI-Prolog bridge enabling to query SWI-Prolog in your Python programs. It features an (incomplete) SWI-Prolog foreign language interface, a utility class that makes it easy querying with Prolog and also a Pythonic interface.


Multilingual text (NLP) processing toolkit


A platform for collecting and disseminating data for the Sustainable Development Goal global indicators.


Public malware techniques used in the wild: Virtual Machine, Emulation, Debuggers, Sandbox detection.


MinHash, LSH, LSH Forest, Weighted MinHash, HyperLogLog, HyperLogLog++, LSH Ensemble and HNSW


Python Spectroscopic Toolkit


Home page of project "KB"


Check out the new game server:


HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.


Pythonic particle-based (super-droplet) warm-rain/aqueous-chemistry cloud microphysics package with box, parcel & 1D/2D prescribed-flow examples in Python, Julia and Matlab


Electrophys Feature Extraction Library


Visual localization made easy with hloc


Reliability Test System - Grid Modernization Lab Consortium


Xv6 for RISC-V


An educational resource to help anyone learn deep reinforcement learning.


Reduce the environmental footprint of your software programs with SonarQube


The tools for your .cool's


Audiocraft is a library for audio processing and generation with deep learning. It features the state-of-the-art EnCodec audio compressor / tokenizer, along with MusicGen, a simple and controllable music generation LM with textual and melodic conditioning.


Generic system-wide modern C++ for heterogeneous platforms with SYCL from Khronos Group


Make some beautiful corner plots


The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools


Official elastix repository


scrape data from the itunes app store


Image augmentation for machine learning experiments.


Lightweight controller library for JavaScript.


Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics


A multi-voice TTS system trained with an emphasis on quality


trends.earth - measure land change


Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library.


Analysis & visualization of energy & climate scenarios


Find duplicate files


A pipeflow calculation tool that complements pandapower in the simulation of multi energy grids


DP3: streaming processing pipeline for radio interferometric data


Rapid large-scale prokaryote pan genome analysis


ESA CCI Toolbox (Cate)


Shadow is a discrete-event network simulator that directly executes real application code, enabling you to simulate distributed systems with thousands of network-connected processes in realistic and scalable private network experiments using your laptop, desktop, or server running Linux.


Optimal Transport tools implemented with the JAX framework, to get auto-diff, parallel and jit-able computations.


Classical force field model for simulating atomic force microscopy images.


gnark is a fast zk-SNARK library that offers a high-level API to design circuits. The library is open source and developed under the Apache 2.0 license


Software, firmware, and hardware designs for Ubertooth


A Complete Server implementation of the OGC SensorThings API


Fast, flexible and extensible genome browser.


A scikit-learn-compatible module for estimating prediction intervals.


Python & command-line tool to gather text on the Web: web crawling/scraping, extraction of text, metadata, comments


smali/baksmali


Calculation engine for the Energy Transition Model


AdelaiDet is an open source toolbox for multiple instance-level detection and recognition tasks.


Machine Learning Toolkit for Kubernetes


MicroPython libraries and examples that work out of the box on Pycom's IoT modules


Mixed-effects models in R using S4 classes and methods with RcppEigen


Easy-to-use,Modular and Extendible package of deep-learning based CTR models .


The Ocean Navigator is an online tool that is used to help visualise scientific research data. a users guide is available at https://dfo-ocean-navigator.github.io/Ocean-Navigator-Manual/ and the tool is live at


A taxonomic toolbelt for R


Scalable and user friendly neural :brain: forecasting algorithms.


MAPL is a foundation layer of the GEOS architecture, whose original purpose is to supplement the Earth System Modeling Framework (ESMF)


:christmas_tree:Visualization and annotation of phylogenetic trees


A PyTorch-based framework for Quantum Classical Simulation, Quantum Machine Learning, Quantum Neural Networks, Parameterized Quantum Circuits with support for easy deployments on real quantum computers.


Julia solvers for systems of nonlinear equations and mixed complementarity problems


A Database of Real Faults and an Experimental Infrastructure to Enable Controlled Experiments in Software Engineering Research


Tools and standards for conducting and evaluating research in software engineering


Unleash public transport data in your Java project.


A scalable and versatile library to generate representations for atomic-scale learning


Source code for Trase API and Frontend applications


Modules for Experiments in Stellar Astrophysics


The Water Distribution System Hydraulic and Water Quality Analysis Toolkit


EvoSuite - automated generation of JUnit test suites for Java classes


A Simulation Environment to train Robots in Large Realistic Interactive Scenes


A Python-based toolbox of various methods in decision making, uncertainty quantification and statistical emulation: multi-fidelity, experimental design, Bayesian optimisation, Bayesian quadrature, etc.


The Python programming language


Stubby is the name given to a mode of using getdns which enables it to act as a local DNS Privacy stub resolver (using DNS-over-TLS).


Plant-for-the-Planet App allows you to plant trees with over 100 reforestation projects around the world.


Ongoing research training transformer language models at scale, including: BERT & GPT-2


ROS# is a set of open source software libraries and tools in C# for communicating with ROS from .NET applications, in particular Unity3D


Performance-portable library for particle-based simulations


Synthetic data generation for tabular data


OpenML AutoML Benchmarking Framework


A linear optimisation model for distributed energy systems


VISTASOFT is the main software repository of the VISTA lab at Stanford University.


a software library containing BLAS functions written in OpenCL


Free Weather Forecast API for non-commercial use


PowerSploit - A PowerShell Post-Exploitation Framework


Easy access to official spatial data sets of Brazil in R and Python


MMseqs2: ultra fast and sensitive search and clustering suite


The Fortanix Rust Enclave Development Platform


This repository provides code for machine learning algorithms for edge devices developed at Microsoft Research India.


Schrödinger and Schrödinger-Feynman simulators for quantum circuits.


VISSL is FAIR's library of extensible, modular and scalable components for SOTA Self-Supervised Learning with images.


Open standard for machine learning interoperability


A tool to collect data for OpenAQ platform.


Python Kalman filtering and optimal estimation library. Implements Kalman filter, particle filter, Extended Kalman filter, Unscented Kalman filter, g-h (alpha-beta), least squares, H Infinity, smoothers, and more. Has companion book 'Kalman and Bayesian Filters in Python'.


Advanced Terrestrial Simulator (ATS) development


A diverse suite of scalable reinforcement learning environments in JAX


Link Discovery Framework for Metric Spaces.


An open-source platform for Visual AI.


Asynchronous Distributed Hyperparameter Optimization.


Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集


Lightning ⚡ fast forecasting with statistical and econometric models.


AI拟声: 5秒内克隆您的声音并生成任意语音内容 Clone a voice in 5 seconds to generate arbitrary speech in real-time


Provides an elaborated data model to model energy systems with a high granularity e.g. for bottom-up simulations. Additionally, useful functionalities to handle the model i/o are provided as well.


C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings


A controls-oriented engineering wake model.


Python Simulation Tool for Fractured and Deformable Porous Media


open Multi-View Stereo reconstruction library


A Python library that helps data scientists to infer causation rather than observing correlation.


Self-driving car simulator for the Duckietown universe


Deep learning software to decode EEG, ECG or MEG signals


Model Evaluation Tools


Elephant is the Electrophysiology Analysis Toolkit


This repostory contains software for the virtual track of the DARPA SubT Challenge. Within this repository you will find Gazebo simulation assets, ROS interfaces, support scripts and plugins, and documentation needed to compete in the SubT Virtual Challenge.


The Vampire Theorem Prover


A general-purpose probabilistic programming system with programmable inference


docTR (Document Text Recognition) - a seamless, high-performing & accessible library for OCR-related tasks powered by Deep Learning.


InternLM has open-sourced 7 and 20 billion parameter base models and chat models tailored for practical scenarios and the training system.


Collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.


Medical imaging toolkit for deep learning


GBIF Integrated Publishing Toolkit (IPT)


FFLAS-FFPACK - Finite Field Linear Algebra Subroutines / Package


BSD 4-Clause "Original" or "Old" License

WhisperX:  Automatic Speech Recognition with Word-level Timestamps (& Diarization)


Marabou Neural Network Verification Framework for Python


Clean PyTorch implementations of imitation and reward learning algorithms


Gaussian Process Optimization using GPy


A community-driven ontology for the representation of environments


a gaggle of deep neural architectures for text ranking and question answering, designed for Pyserini


PyWavelets - Wavelet Transforms in Python


A Julia library for efficient tensor computations and tensor network calculations


Google Brain AutoML


Facilitating the design, comparison and sharing of deep text matching models.


Toolkit for efficient experimentation with Speech Recognition, Text2Speech and NLP


A fast WebAssembly interpreter and the most universal WASM runtime


On self sovereign human identity.


SoftVC VITS Singing Voice Conversion


Tessera - Enterprise Implementation of Quorum's transaction manager


Neural building blocks for speaker diarization: speech activity detection, speaker change detection, overlapped speech detection, speaker embedding


Rust for C++ programmers


Apache Lucene and Solr open-source search software


Awesome video understanding toolkits based on PaddlePaddle. It supports video data annotation tools, lightweight RGB and skeleton based action recognition model, practical applications for video tagging and sport action detection.


RandomX, KawPow, CryptoNight and GhostRider unified CPU/GPU miner and RandomX benchmark


A high-performance distributed training framework for Reinforcement Learning


Schema and generated objects for biolink data model and upper ontology


Robust Speech Recognition via Large-Scale Weak Supervision


Message Passing Neural Networks for Molecule Property Prediction


An open source loadflow based on PowSyBl


Simulation-based inference toolkit


IBM Client for Qiskit Runtime.


Documentation of Bike Sharing APIs


Quickly search, compare, and analyze genomic and metagenomic data sets.


TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...


SeqAn's official repository.


Reference implementations of MLPerf™ training benchmarks


Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM database


An elegant PyTorch deep reinforcement learning library.


InSAR Scientific Computing Environment version 2


Responsible AI Toolbox is a suite of tools providing model and data exploration and assessment user interfaces and libraries that enable a better understanding of AI systems. These interfaces and libraries empower developers and stakeholders of AI systems to develop and monitor AI more responsibly, and take better data-driven actions.


DESI simulations


igraph R package


MONAI Tutorials


Apache Commons Math


Python tools for obtaining and working with ICESat-2 data


Origin is a set of toolkits that together provide a system for issuance and management of Energy Attribute Certificates


A Hyperparameter Tuning Library for Keras


A Monte Carlo simulation package for radio neutrino detectors


libAtoms/QUIP molecular dynamics framework: https://libatoms.github.io


Programmable CUDA/C++ GPU Graph Analytics


SPHinXsys provides C++ APIs for physically accurate simulation and optimization. It aims to handle coupled industrial dynamic systems including fluid, solid, multi-body dynamics and beyond. The multi-physics library is based on a unique and unified computational framework by which strong couplings have been achieved for all involved physics.


CARMA Platform is built on robot operating system (ROS) and utilizes open source software (OSS) that enables Cooperative Driving Automation (CDA) features to allow Automated Driving Systems to interact and cooperate with infrastructure and other vehicles through communication. Doxygen Source Code Documentation :


Boogie


SMAC3: A Versatile Bayesian Optimization Package for Hyperparameter Optimization


This fork of BVLC/Caffe is dedicated to improving performance of this deep learning framework when running on CPU, in particular Intel® Xeon processors.


Uplift modeling and causal inference with machine learning algorithms


YOLOX is a high-performance anchor-free YOLO, exceeding yolov3~v5 with MegEngine, ONNX, TensorRT, ncnn, and OpenVINO supported. Documentation: https://yolox.readthedocs.io/


Automatic License Plate Recognition library


3D Reconstruction Software


In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more


LevelDB is a fast key-value storage library written at Google that provides an ordered mapping from string keys to string values.


A concrete syntax tree parser and serializer library for Python that preserves many aspects of Python's abstract syntax tree


A library for scientific machine learning and physics-informed learning


A command line tool (and Python library) for archiving Twitter JSON


An Open, Scalable, Portable, Ray Tracing Based Rendering Engine for High-Fidelity Visualization


A Python SDK for interacting with quantum devices on Amazon Braket


Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities


Go engine with no human-provided knowledge, modeled after the AlphaGo Zero paper.


A unified, comprehensive and efficient recommendation library


Thai Natural Language Processing in Python.


Automated modeling and machine learning framework FEDOT


An Iterative Closest Point (ICP) library for 2D and 3D mapping in Robotics


GEOS-Chem "Science Codebase" repository.  Contains GEOS-Chem science routines, run directory generation scripts, and interface code.  This repository is used as a submodule within the GCClassic and GCHP wrappers, as well as in other modeling contexts (external ESMs).


Main repository for the NREL-supported OpenFAST whole-turbine and FAST.Farm wind farm simulation codes.


sourcecode for reading sensor data


PyPSA: Python for Power System Analysis


A comprehensive set of fairness metrics for datasets and machine learning models, explanations for these metrics, and algorithms to mitigate bias in datasets and models.


SCION Internet Architecture


Next generation cryptocurrency network


CodeQL: the libraries and queries that power security researchers around the world, as well as code scanning in GitHub Advanced Security


Swift for TensorFlow


A powerful  Android chart view / graph view library, supporting line- bar- pie- radar- bubble- and candlestick charts as well as scaling, panning and animations.


IOTA Reference Implementation


Pangolin is a lightweight portable rapid development library for managing OpenGL display / interaction and abstracting video input.


BCC - Tools for BPF-based Linux IO analysis, networking, monitoring, and more


A high-throughput and memory-efficient inference and serving engine for LLMs


:chains: A Framework for Building High Value Public Blockchains :sparkles:


functorch is JAX-like composable function transforms for PyTorch.


Self-Supervised Speech Pre-training and Representation Learning Toolkit


Graphical Java application for managing BibTeX and biblatex (.bib) databases


Machine learning on FPGAs using HLS


Deep probabilistic analysis of single-cell omics data


A library of reinforcement learning components and agents


Python package for graph statistics


Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.


"Multi-Level Intermediate Representation" Compiler Infrastructure


Optax is a gradient processing and optimization library for JAX.


novel deep learning research works with PaddlePaddle


SciPy library main repository


A Fundamental End-to-End Speech Recognition Toolkit and Open Source SOTA Pretrained Models.


Distributed Evolutionary Algorithms in Python


Savoury implementation of the QUIC transport protocol and HTTP/3


JAX-based neural network library


Online machine learning in Python


PEFT: State-of-the-art Parameter-Efficient Fine-Tuning.


End-to-End Speech Processing Toolkit


Mirror of Apache Kafka


Liquid Types For Haskell


Hazelcast is a unified real-time data platform combining stream processing with a fast data store, allowing customers to act instantly on data-in-motion for real-time insights.


WebAssembly Design Documents


RAJA Performance Portability Layer (C++)


PlaidML is a framework for making deep learning work everywhere.


Zuul is a gateway service that provides dynamic routing, monitoring, resiliency, security, and more.


Cloud Carbon Footprint is a tool to estimate energy use (kilowatt-hours) and carbon emissions (metric tons CO2e) from public cloud usage


fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.


Cloud-native genomic dataframes and batch computing


openpilot is an open source driver assistance system. openpilot performs the functions of Automated Lane Centering and Adaptive Cruise Control for 250+ supported car makes and models.


Static Type Checker for Python


Fetch Standard


Zstandard - Fast real-time compression algorithm


Dex to Java decompiler


OpenModelica is an open-source Modelica-based modeling and simulation environment intended for industrial and academic usage.


Aer is a high performance simulator for quantum circuits that includes noise models


Automated Machine Learning with scikit-learn


A fast library for AutoML and tuning. Join our Discord: https://discord.gg/Cppx2vSPVP.


Multi-user server for Jupyter notebooks


CUDA Templates for Linear Algebra Subroutines


The open-source tool for building high-quality datasets and computer vision models


A fast image processing library with low memory needs.


OpenEMS - Open Source Energy Management System


A modern, C++-native, test framework for unit-tests, TDD and BDD - using C++14, C++17 and later (C++11 support is in v2.x branch, and C++03 on the Catch1.x branch)


Main gperftools repository


Climate Machine: an Earth System Model that automatically learns from data


WildFly Application Server


Model interpretability and understanding for PyTorch


The BGP swiss army knife of networking


The main firmware for the Crazyflie Nano Quadcopter, Crazyflie Bolt Quadcopter and Roadrunner Positioning Tag.


Application Security Verification Standard


The client of the future


Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development.  See the Developer Process Wiki for details.


ANTLR (ANother Tool for Language Recognition) is a powerful parser generator for reading, processing, executing, or translating structured text or binary files.


The Prometheus monitoring system and time series database.


Supercharge Your Model Training


A framework for distributed systems verification, with fault injection


Primary repository for the Trilinos Project


FlatBuffers: Memory Efficient Serialization Library


Manipulation and analysis of geometric objects


Officially maintained, supported by PaddlePaddle, including CV, NLP, Speech, Rec, TS, big models and so on.


:zap: A Fast, Extensible Progress Bar for Python and CLI


OSS implementation of the TCG TPM2 Software Stack (TSS2)


SmartThings open-source DeviceType Handlers and SmartApps code


Haskell source code suggestions


- a deep learning toolkit for Text-to-Speech, battle-tested in research and production


21st century AD


The official repository for the Weather Research and Forecasting (WRF) model


Comprehensive and open-source library of analysis tools for MRI of the spinal cord.